Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0013 ATGTTACAATCCTACTTAGTTAGGATACCTTCTTTTCTACTCCTGGTTTTCTCTTTGCATACTTTGGCCGATCTTAATTCAGAAAAGCAAGCTCTCCTTGACTTTGCTGCTGCAGTTCATCACGGCCAAAAAATTAATTGGAATTCTGATATCTCTATCTGCACTTGTTGGGTGGGAATCACTTGCAGCCCAAATGGCTCGCACGTGCTTGCTCTGCGGCTTCCTGGCATTGGACTGCGTGGCTCTCTCCCTGCCAATACAATTAGTAAGCTACATGGTCTCATGATTCTCAGTCTTCGATCCAACAGCCTGAGCGGAAATCTTCCAAATGACGTACTTTCCCATCGTTCCCTCCGCTTTATATATCTTCAATATAACAACTTTTCAGGCGACATCCCTCACTCTCTGTCTCACCAGCTTGACTTTCTTGATCTGTCCTACAACTCTTTCACTGGAAAAATCCCATCCTTAATTCAGAACTTGCCATATCTAACTGGATTAAAACTCCAGAATAACTCTCTCAGCGGACCCATCCCGGATTTAAACCTCCCAAAGCTTAAGATTTTGAATTTGAGCTACAACAATTTGAATGGTTCAATTCCTTCAGCCCTCCAGAAATTTCCTTCCTCCTTATTTCGAGGGAATCTCAAGTTATGTGGACAACCAGTATACCAATGTTCTTCAGTTTCCCCATCTTACGCGCTGTCTCCACCAGCGGTCTGGTCAAAACCAAGTGATCTCTCCAACAGGAAGCTGAATACAGGTGCTATAATTGCCATTGCCTTCATTGGTTTTACACTGCTGTTTCTTCCGCTTTTGATGGTAGTGTTGTGCTGTCTCAAGAAAAGAGATGGTGGACAAAATGCAACGCTTAAAGGCAAGGATGACAAGCTTAAGGAGGACTTTGGGAGTGGAGTGCAAGAACCAGAGAAGAACAAGCTAATATCTTTTGAAGGCTGTTCTTATAGTTTTGATCTTGAGGACCTATTAAGAGCTTCTGCTGAGGTACTTGGGAAGGGAAGCTGTGGGACGACTTACAAAGCCATCTTGGAGGAGGGTACGGCAGTGGTTGTGAAGAGGTTAAAAGAAGTAGCGGCAGGGAAAAAAGAATTTGAACAACAAATGGAGACTGTTCAAAGGCTAGGTCATCACCGAAATGTTATTCCTGTCCGTGCTTATTACTACTCCAAGGACGAAAAACTGCTGGTTTATGATTACATAGCAGTTGGAAGCCTTTCCAGGCTATTGCATGGAACCAAGGGAACTGGGCGAACTCCATTAAGTTGGGAATCCAGACTGAAGATCTCTCTTGGAGCTGCTAGGGGTATTGCACATATCCACTCCGCTAGCGGACGGAAATTTGTGCATGGCAATATAAAATCATCTAATGTGCTTGTCACAGTAGATGTTGAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCATTTTCTCTGTCTCATCTACAAGTCTAGGGTACCAAGCACCTGAGGCTATTGAAACCCGAAAATCCTCCCAGAAGTCTGATGTATATAGCTTTGGCGTTGTCCTTCTTGAGATGCTAACAGGCAAAACACCAGTCGAGCATTCAGGTAGTGACGATGTGGTAGATCTTCCAAAGTGGGTTCAGTCTGTTGTTAGGGAGGAATGGACTGGTGAAGTATTTGATGTAGAGCTGATGAGGTATCCAAATATTGAAGAAGAACCGTTGCAGATGCTGCAGTTAGCAATGGCATGTGTGGCAAGGGAGCCTGGCACAAGACCTTCAATGGAGGAAGTCGTTAAAATAATTGAAGAGATCAGAGCATCCAATTCCGAGTGCACGAATCTCGGCCCTTCATCATCATTGTCCTCCATTGAGAGGAACCCAAATCTGCGTCTCCCTCTCTGCGTCATGACGGTGAGGAGGAAGGAAAGCATGGGTGATGAAGATGACGACGACAAGAAAGAGGCATAA 1959 0.4441 MLQSYLVRIPSFLLLVFSLHTLADLNSEKQALLDFAAAVHHGQKINWNSDISICTCWVGITCSPNGSHVLALRLPGIGLRGSLPANTISKLHGLMILSLRSNSLSGNLPNDVLSHRSLRFIYLQYNNFSGDIPHSLSHQLDFLDLSYNSFTGKIPSLIQNLPYLTGLKLQNNSLSGPIPDLNLPKLKILNLSYNNLNGSIPSALQKFPSSLFRGNLKLCGQPVYQCSSVSPSYALSPPAVWSKPSDLSNRKLNTGAIIAIAFIGFTLLFLPLLMVVLCCLKKRDGGQNATLKGKDDKLKEDFGSGVQEPEKNKLISFEGCSYSFDLEDLLRASAEVLGKGSCGTTYKAILEEGTAVVVKRLKEVAAGKKEFEQQMETVQRLGHHRNVIPVRAYYYSKDEKLLVYDYIAVGSLSRLLHGTKGTGRTPLSWESRLKISLGAARGIAHIHSASGRKFVHGNIKSSNVLVTVDVEGCISDFGLTPLIIFSVSSTSLGYQAPEAIETRKSSQKSDVYSFGVVLLEMLTGKTPVEHSGSDDVVDLPKWVQSVVREEWTGEVFDVELMRYPNIEEEPLQMLQLAMACVAREPGTRPSMEEVVKIIEEIRASNSECTNLGPSSSLSSIERNPNLRLPLCVMTVRRKESMGDEDDDDKKEA 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0013 652 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 407 611 - -
Lele39g0013 652 Gene3D Phosphorylase Kinase; domain 1 299 406 - -
Lele39g0013 652 CDD STKc_IRAK 337 601 - -
Lele39g0013 652 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lele39g0013 652 Pfam Protein tyrosine and serine/threonine kinase 335 597 IPR001245 GO:0004672|GO:0006468
Lele39g0013 652 ProSiteProfiles Protein kinase domain profile. 331 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0013 652 FunFam pollen receptor-like kinase 1 299 406 - -
Lele39g0013 652 PANTHER OS05G0588300 PROTEIN 12 607 - -
Lele39g0013 652 SUPERFAMILY L domain-like 43 211 - -
Lele39g0013 652 Gene3D Transferase(Phosphotransferase) domain 1 408 615 - -
Lele39g0013 652 FunFam Probable inactive receptor kinase RLK902 25 182 - -
Lele39g0013 652 Gene3D Ribonuclease Inhibitor 182 227 IPR032675 -
Lele39g0013 652 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Lele39g0013 652 SUPERFAMILY Protein kinase-like (PK-like) 335 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0013 Lele-ChrLele39 106373 108643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0013 12 628 Receptor kinase-like Gene Family AT5G58300 60.160 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele39g0013 PK_Tyr_Ser-Thr 2.6e-35 CL0016