Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0009 ATGATCAAATATGCCCCTAGTCCATTTAGATTATTACTTGATTTTGCTCGACAGCGTCATGGAAGAGTGCATTTAATGTTAATGAATGCTTTGATGGAAGGAGGAGGTATACTGTTGGGCATAATGGGGAAGCTGAAGAACTGTGGGGAGGAGGAGGAGGATGAGGGGTACAGCCTGAGCTGGAGGATGGCGGTGGAGACGAACAATGCGGGGTCGTGGAGGAGGGTGCCGGAGCGGTGCTACAGGCATGTGGAGAGGTACATGATGGAGGGGCAGTACCGGCGGGAGGTGGAGATGATAAAAGAGCAGATATTGGAATATGTGAAGGGCATAGAGGTAGGACCCGCAGGCAAGGACGGGTGGGTCATGGACGTGGACGACACCTGCATCTCCAACCTCGGCTATTACAAACACCATGCTTTTGGCTGCGAGGCCTTTGATTCCGCCAAGTTCAAGCGGTGGATCATGAGGGCAGAGTGCGACGCCATTCCGCCCATGTTGGTGCTCTTCCGAGAACTGCTCCGCCGAGGATTCAAGGTCTTCCTCATCACCGGCAGAGACCATGCCCACATGGCCCACATCACCTCTCTCAACTTGCATCGCCAAGGATTCGTAGGCTACCACCGCCTTCTTCTTAGGAGTGAAGAGCACAAGGGGGAAAGTGCGGCGAAATACAAGTCAGAGATGAGAAGGAAGATAGAAGGAGAAGGATATAAAATATGGGGCAACGTGGGAGACCAGTGGAGTGATCTCCAGGGTTACTCTTTGGGGCATCGTACTTTCAAACTCCCCAATCCCATGTATTGCATCCCTTAA 816 0.5233 MIKYAPSPFRLLLDFARQRHGRVHLMLMNALMEGGGILLGIMGKLKNCGEEEEDEGYSLSWRMAVETNNAGSWRRVPERCYRHVERYMMEGQYRREVEMIKEQILEYVKGIEVGPAGKDGWVMDVDDTCISNLGYYKHHAFGCEAFDSAKFKRWIMRAECDAIPPMLVLFRELLRRGFKVFLITGRDHAHMAHITSLNLHRQGFVGYHRLLLRSEEHKGESAAKYKSEMRRKIEGEGYKIWGNVGDQWSDLQGYSLGHRTFKLPNPMYCIP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0009 271 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 47 270 - -
Lele39g0009 271 PIRSF VSP 23 271 IPR014403 -
Lele39g0009 271 Gene3D - 54 271 IPR023214 -
Lele39g0009 271 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 53 269 IPR005519 -
Lele39g0009 271 CDD HAD_VSP 84 270 - -
Lele39g0009 271 TIGRFAM plant-AP: plant acid phosphatase 50 270 IPR010028 GO:0003993
Lele39g0009 271 SUPERFAMILY HAD-like 117 268 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0009 Lele-ChrLele39 89230 91371 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g0009 39 89230 91371 Lele41g0295 41 2409992 2410579 CCT
Lele39g0009 39 89230 91371 Lele42g0290 42 2464978 2465562 CCT
Lele39g0009 39 89230 91371 Lele43g1075 43 19212805 19213392 CCT
Lele39g0009 39 89230 91371 Lele44g1059 44 19303179 19303763 CCT
Lele37g1415 37 22857302 22860447 Lele39g0009 39 89230 91371 hybridization
Lele38g1290 38 23644873 23648508 Lele39g0009 39 89230 91371 hybridization