Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0007 ATGGATTTATTCTTGTATCATACAGAACATCTGTATATTCATGAGAAAGCCTACCAAGCAGCTCATTTGATTCTTAGTCAATCTCTAACCATCGACTTTCTTCCTTTTAGATTGCTAAAGAATAACACAACACAAGTCATTGACTCACCCTCAACTGTTGAAGAAGATGATGATTCTCTGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACTTGATGGAACAATTGAACAAATTATTTTCTCTTCAGGTGGAGATATCGATGTTTGTGATCTTCAAGGTCTTTGTGATAAGGTGGGGTGGCCTCGGAGGCCTTTGTCAAAACTATCTGCTGCTTTGAAGAATAGCTATATGGTGGCCTCACTGCATTCCATCAGAAAGTCACCTGGCTCAGTTTCAGAGGAAAATGGGAAGATGAAACTAATTGGCATGGCCCGTGCAACATCAGACCATGCCTTCAATGCTACAATATGGGATGTCCTCATTGATCCTAGCTATCAGGCTAATGAAGTAATCATGGGCCAAGGCCTTGGGAAGGCTCTTGTGGAGAAATTGATTCGGGCTCTTCTGCAAAGAGACATTGGAAATATAACTCTATTTGCAGATAGTCAAGGTATAGTAATATTAACAACCTTCATGCATAATGTTATTGATGTTCGATATGGTCAACTTTTAGTGCAACATGTCAAAGTGGACCGGTCTGTCTGTGTCTGGCTTCAATTCAAAGTTATTCTGTGGTTTGCCAATGGCCCTCTACTGCTGCAGAATTTTCATTCCGCTTCCATTCCCTTCCAAATTGTTACTTCATTTCGTATCAGTGCTATTCCTTGTAGTGTAAATAGTTCTTATGCCACCTAA 858 0.4021 MDLFLYHTEHLYIHEKAYQAAHLILSQSLTIDFLPFRLLKNNTTQVIDSPSTVEEDDDSLPQEFVLVEKTELDGTIEQIIFSSGGDIDVCDLQGLCDKVGWPRRPLSKLSAALKNSYMVASLHSIRKSPGSVSEENGKMKLIGMARATSDHAFNATIWDVLIDPSYQANEVIMGQGLGKALVEKLIRALLQRDIGNITLFADSQGIVILTTFMHNVIDVRYGQLLVQHVKVDRSVCVWLQFKVILWFANGPLLLQNFHSASIPFQIVTSFRISAIPCSVNSSYAT 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0007 285 CDD NAT_SF 132 199 - -
Lele39g0007 285 Pfam Acetyltransferase (GNAT) family 91 199 IPR000182 GO:0016747
Lele39g0007 285 PANTHER ACYL-COA N-ACYLTRANSFERASE 39 207 IPR045039 GO:0008080
Lele39g0007 285 Gene3D - 84 208 - -
Lele39g0007 285 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 89 204 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0007 Lele-ChrLele39 69341 72073 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele39g0007 Acetyltransf_1 8.1e-07 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0290 42 2464978 2465562 Lele39g0007 39 69341 72073 CCT
Lele43g1075 43 19212805 19213392 Lele39g0007 39 69341 72073 CCT
Lele44g1059 44 19303179 19303763 Lele39g0007 39 69341 72073 CCT
Lele41g0294 41 2406197 2406838 Lele39g0007 39 69341 72073 CCT
Lele37g1417 37 22866707 22870526 Lele39g0007 39 69341 72073 hybridization
Lele38g1293 38 23665016 23665979 Lele39g0007 39 69341 72073 hybridization