Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0002 ATGACAGGTACTATGGGTTTAATAGCGACGACATGGAATTCTTTGAGAAGGAAGCTTCAACTAAAAACGAGGGTTCTTCATACGGTAAAAGAAGGACATAGGAGCGAAATTTTAATGTCTCCACCTCTTGTTTCTCTGGACATACCTGAAATCTGGACTCCAAATTCGTCACGTTTTAGTGTTTCATCAGTACACAAAAGCTTTAACGAACAGACTGCTAGGGTGCTTGATGGAAAAATGATTTCTATGGAAATCAGATCAAGCATAGCTGGTGAGGTAAGGCGGATGAAGATGTGCACTGGGAGAGTTCCTGGGTTAGCTGTGATTCTGGTGGGCCAGAGATGGGATTCTCAGATTTATGTTCGCAACAAGATAAAGGCATGTGAAGAAGTTGGAATCAAGTCCTCTGTGACTGAACTACCGACTGATTGTACAGAAGCCGAAGTTCGGAATGCTTTGTTGAGATTTAACAAAGATCCATCAATTCATGGTATTCTTGTGCAACTTCCTCTACCCCAACATCTCGATGAAGGCCAAGTTTTGGATGTTCTATGCCTAGAAAAGGACGTGGATGGCTTTCATCCTCTTAATATGGGGAATCTCGCCATAATTGGAAGGGAACCACTATTTATTCCCTGTACTCCAAAGGGTTGCATTGAGTTATTGATTAGGTCTGGAGTGGAGATCGTAGGGAAGAAAGCTGTTGTGATTGGAAGAAGTAATATTGTCGGTTTACCCACATCCTTGTTATTGCAGAGACACCATGCAACGGTCACTGTTATACATGCATTTACAGAAAATCCTGAACAGATCACTTCAGAAGCCGATATTATAGTTTCGGCTGCTGGAGTACCTAATATGGTCCGTGGCAACTGGATAAAGCCTGGTGCAATAGTCATTGACGTTGGAACAAGTCCAGTCGAGGACTCAAACTGCGAGGATGGGTACCGTCTCATGGGGGATGTATGCTATGAAGAAGCAGAAAATGTGGCATCTGTTATTACTCCTGTTCCGGGTGGAGTTGGACCTATGACGGTTGCCGTGCTACTGTCTAACACTCTAGATTCTGCAAAACGCATGCTTGATTTTACTTGA 1095 0.4329 MTGTMGLIATTWNSLRRKLQLKTRVLHTVKEGHRSEILMSPPLVSLDIPEIWTPNSSRFSVSSVHKSFNEQTARVLDGKMISMEIRSSIAGEVRRMKMCTGRVPGLAVILVGQRWDSQIYVRNKIKACEEVGIKSSVTELPTDCTEAEVRNALLRFNKDPSIHGILVQLPLPQHLDEGQVLDVLCLEKDVDGFHPLNMGNLAIIGREPLFIPCTPKGCIELLIRSGVEIVGKKAVVIGRSNIVGLPTSLLLQRHHATVTVIHAFTENPEQITSEADIIVSAAGVPNMVRGNWIKPGAIVIDVGTSPVEDSNCEDGYRLMGDVCYEEAENVASVITPVPGGVGPMTVAVLLSNTLDSAKRMLDFT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0002 364 Hamap Bifunctional protein FolD [folD]. 73 361 IPR000672 GO:0004488
Lele39g0002 364 Gene3D Leucine Dehydrogenase, chain A, domain 1 78 355 - -
Lele39g0002 364 Gene3D - 76 337 - -
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 227 247 IPR000672 GO:0004488
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 317 333 IPR000672 GO:0004488
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 145 172 IPR000672 GO:0004488
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 334 352 IPR000672 GO:0004488
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 180 201 IPR000672 GO:0004488
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 276 305 IPR000672 GO:0004488
Lele39g0002 364 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 104 126 IPR000672 GO:0004488
Lele39g0002 364 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 72 359 - -
Lele39g0002 364 FunFam Bifunctional protein FolD 210 337 - -
Lele39g0002 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 193 358 IPR036291 -
Lele39g0002 364 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 194 359 IPR020631 GO:0004488
Lele39g0002 364 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 73 192 IPR046346 -
Lele39g0002 364 FunFam C-1-tetrahydrofolate synthase, cytoplasmic, putative 78 217 - -
Lele39g0002 364 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 76 191 IPR020630 GO:0004488
Lele39g0002 364 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 338 346 IPR020867 GO:0003824
Lele39g0002 364 CDD NAD_bind_m-THF_DH_Cyclohyd 187 358 IPR020631 GO:0004488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0002 Lele-ChrLele39 30588 37073 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1423 37 22907997 22920727 Lele39g0002 39 30588 37073 hybridization