Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1290 ATGGCGGTGGAGATGAACAACGCGGGGCTGTGGAGGAGGGTTCCGGAGCGGTGTTACAGACACGTGGACAGGTACATGACGGAGGGGCAGTACCGGCGGGATGTGGAGATGATAAAAGAGCAGATCCTGGAATATGTGAAGGGCATAGAAGTGGGAGCGGCAGGCAAGGACGGGTGGGTCGTGGACGTGGACGACACCTGCATCTCCAACGTCGGCTATTACAAACACCATGCTTTTCGCTGCGAGGCCTTTGATTCCGCCAAGTTCAAGCAGTGGATCAGGAAGGCCAGTGTGACGCCATCCCGCCCATGTTGGTGCTCTTCCGGGAGCTGCTCCTCCGAGGATTCAAGGTCTTCCTCATCACCGGCAGAGACAGTGCCCGCATGGCCCGCATCACCTCTCTCAACTTGCATCGCCAAGGATTCGTCGGCTACCACCGTCTTCTTCTTAGGAAAGATGAACGACGCAGATGTTTCAAAGCAAATCCAGCAGATGATCAGATTCATCCGCCAAGAGGCTGAGGAGAAAGCCAACGAGATCTCCGTCGCTGCCGAAGAGGAATTCAACATCGAGAAACTTCAATTACTTGAAGCTGAGAAGAGAAGGATCAGGCAAGAATATGAACGGAAAGCCAAACAGGTTGACATTCGCAAAAAAATTGAATACTCGATGCAGCTGAATGCATCGCGTATAAAAGTACTTGAAGCACAAGATCAAGTGGTGAATTCAATAAAGGAATCTGCTAGCATGGAGCTTTCGCGGATCTCTGATGATAAGAAAGTGTACAGAAATCTGATGAAAACGTTGATTGTCCAGGGTCTGGTGAGGCTTAGGGAACCGGCAGTGATACTGCGGTGCAGGGAGGTTGATCGGAAGCTGGTGGAGTCAGTGGTGGATGAAGCCAAAAAGGAATATTCAGAGAAAGCGAAAGTGCAGGCGCCAAAGATCATGATCGATGAACGAGTTTATCTGCCTTCAGCTCCCAAATCTGGCAACTCGCACGAACCTTTCTGCTCCGGAGGAATAGTATTGGCATCGGAGGATGGGAAGATCGTGTTGGAGAACACTCTTGATGCAAGGCTTGATGTCATTTTCCGCCACAAACTCCCTCAGATCCGGAAGCGCCTTTTAGGTTGA 1137 0.5101 MAVEMNNAGLWRRVPERCYRHVDRYMTEGQYRRDVEMIKEQILEYVKGIEVGAAGKDGWVVDVDDTCISNVGYYKHHAFRCEAFDSAKFKQWIRKASVTPSRPCWCSSGSCSSEDSRSSSSPAETVPAWPASPLSTCIAKDSSATTVFFLGKMNDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRRIRQEYERKAKQVDIRKKIEYSMQLNASRIKVLEAQDQVVNSIKESASMELSRISDDKKVYRNLMKTLIVQGLVRLREPAVILRCREVDRKLVESVVDEAKKEYSEKAKVQAPKIMIDERVYLPSAPKSGNSHEPFCSGGIVLASEDGKIVLENTLDARLDVIFRHKLPQIRKRLLG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1290 378 MobiDBLite consensus disorder prediction 101 125 - -
Lele38g1290 378 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 153 378 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lele38g1290 378 Hamap V-type proton ATPase subunit E [atpE]. 160 378 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lele38g1290 378 Pfam ATP synthase (E/31 kDa) subunit 168 376 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lele38g1290 378 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 2 97 IPR005519 -
Lele38g1290 378 Coils Coil 190 213 - -
Lele38g1290 378 Coils Coil 159 186 - -
Lele38g1290 378 MobiDBLite consensus disorder prediction 100 125 - -
Lele38g1290 378 Gene3D - 1 103 IPR023214 -
Lele38g1290 378 Gene3D - 149 214 - -
Lele38g1290 378 SUPERFAMILY V-type ATPase subunit E-like 240 377 - -
Lele38g1290 378 Gene3D - 243 378 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1290 Lele-ChrLele38 23644873 23648508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1290 153 378 Primary Pumps ATPases(2) AT3G08560 68.860 8.55e-111 322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1290 38 23644873 23648508 Lele39g0009 39 89230 91371 hybridization
Lele38g1290 38 23644873 23648508 Lele40g1238 40 22147559 22148834 hybridization