Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1287 ATGATGTTACAATCCTACTTACTTAGGATACCTTCTTTTCTACTCGTGATTTTCTCTTTGCATACTTTGGCTGATCTTAATTCAGAAAAGCAAGCTCTCCTTGACTTTGCTGCTGCGGTTCATCACGGCCAAAAAATTAATTGGAATTCTGATAACTCAATCTGCACTTGTTGGGTGGGAATCACTTGCAGCCCAAATGGCTCGCATGTGCTTGCTCTGCAGCTTCCTGGCGTTGGACTGCGTGGCTCTCTCCCTCCCAATACGATTAGTAAGCTACATGGTCTCATGATTCTCAGTCTTCGCTCCAACAGCCCGAGCAGAAATCTTCCAAATGACATACTTTCCCATCGTTCCCTCCGCTTTATATACCTCAATTCAACAACTTTTCAGTTATGTGGACCACCTGTATCCCAATGTTCTTCAGTTTCCCCATCTTACGTGCTGTCTCCACCAACGGTCTCGTCAGAACCAAGCGATCTCTCCAACGGGAAGCTGAATACAGGTGCTATAATTGCAATTGCGTTCATTGGGTTTAAGGAGGACTTTGGGAGTGGAGTGCAAGAACCAGAGAAAAACAAGCTAATATCTTTTGAAGGTTGTTCCTATAGTTTTGATCTTGAGGACCTGTTAAGAGCTTCTGCCAAGGTACTTGGGAAGGGAAGCTGCGGGACGACTTACAAAGCCATCTGGGAGGAGGGTACGGCAGTGGTTGTGAAGAGGTTAAAAGAAGTAGTGGTAGGGAAAAAAGAATTTGAACAACAAATGGAAACTGTTCAAATCCGCGCTTACTACTACTCAAAGGACGAAAAACTGCAGGTTTATGATTACATTGCAGTTGGAAGCCTTTCCAACCTATTGCATGGTAAGAACCAATGGAGCTGGACGAACTCCATTAGATTCGGAATCCGACTGAAGCTCTCACTTGGAGCTGCTAGGGGTATTGCATATATCCACTCAGCTAGCGGACGGAAATTTGTGCATGGCAATATAAAATCATCTAATGTGCTTGTCGCAGAAGATTTTGAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCAGTTTCTCTGTCCCATCTATCGAGCATTCAAGGAATGATGATGTGGTTGATCTTCCAAAGTGGGTTCAATCTGTGGTCAGGGAGGAATGGACTGGTGAAGTATTTGATGTGGAGCTGATAAGGTATCCAAATATTGAAGAAGAACTGGTGCAGATGATGCAGTTAGCAATGGCATGTGTGGCAACGGAGTCTGACACGAGACCTTCAATGGAGGAAGTCGTTAAACTAATTGTAGAGATTAGAGCATCCAATTACGAGTGCACGAATTTAAAATTCGTAGTTATGCGAAAAATAATAGAGTTACAACTAGCGGATACTCGAACTTACAACATAGAGACGCATACAATATGTGGGATATCTATCTCTTCCTTGATAGCATCAATATTCTGA 1452 0.4311 MMLQSYLLRIPSFLLVIFSLHTLADLNSEKQALLDFAAAVHHGQKINWNSDNSICTCWVGITCSPNGSHVLALQLPGVGLRGSLPPNTISKLHGLMILSLRSNSPSRNLPNDILSHRSLRFIYLNSTTFQLCGPPVSQCSSVSPSYVLSPPTVSSEPSDLSNGKLNTGAIIAIAFIGFKEDFGSGVQEPEKNKLISFEGCSYSFDLEDLLRASAKVLGKGSCGTTYKAIWEEGTAVVVKRLKEVVVGKKEFEQQMETVQIRAYYYSKDEKLQVYDYIAVGSLSNLLHGKNQWSWTNSIRFGIRLKLSLGAARGIAYIHSASGRKFVHGNIKSSNVLVAEDFEGCISDFGLTPLISFSVPSIEHSRNDDVVDLPKWVQSVVREEWTGEVFDVELIRYPNIEEELVQMMQLAMACVATESDTRPSMEEVVKLIVEIRASNYECTNLKFVVMRKIIELQLADTRTYNIETHTICGISISSLIASIF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1287 483 SUPERFAMILY Protein kinase-like (PK-like) 215 430 IPR011009 -
Lele38g1287 483 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lele38g1287 483 ProSiteProfiles Protein kinase domain profile. 211 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1287 483 Pfam Protein tyrosine and serine/threonine kinase 215 354 IPR001245 GO:0004672|GO:0006468
Lele38g1287 483 Gene3D Phosphorylase Kinase; domain 1 180 276 - -
Lele38g1287 483 PANTHER OS05G0588300 PROTEIN 14 129 - -
Lele38g1287 483 Gene3D Transferase(Phosphotransferase) domain 1 361 452 - -
Lele38g1287 483 Gene3D Transferase(Phosphotransferase) domain 1 278 360 - -
Lele38g1287 483 SUPERFAMILY L domain-like 42 134 - -
Lele38g1287 483 Gene3D Ribonuclease Inhibitor 26 170 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1287 Lele-ChrLele38 23627804 23630783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1287 86 442 Receptor kinase-like Gene Family AT5G58300 44.946 4.30e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele38g1287 PK_Tyr_Ser-Thr 8.8e-13 CL0016