Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1276 ATGAGTTACAGCGACAGGAACAGAGGAGCAAAAGAGAGGGAATGTGAAGAGTCGATCTTGCAGAATTCTGGGGAATTAGAGTCCAAATCGGTTGGGCAGAATGGATCGATTACAACCCCACCGCTAACAATTGATGAGAATCTTCTGGTTGACCCTAAACAACTCTTCATTGGGTCAAAAATCGGTGAAGGAGCTCATGGGAAGGTTTATGAAGGAAGGTATGGAGATCAAATTGTTGCAATTAAGGTTCTGCATCGTGGGAGCACTTCAGACGAGAGAGCAGCCCTTGAAAATCGTTTTGCTAGGGAGGTTAATATGATGTCCCGTGTCCATCATGAGAATCTGGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTTATAGTCACAGAGCTTTTACCCGGGATGTCGCTGAGGAAATATTTGACTAGCATACGCCCTGGACTATTAGACTGTCAGGTGGCCATAAACTTTGCCCTTGATGTTGCTCGGGCCATGGATTGCCTACACGCTAATGGGATCATACATAGAGATTTGAAACCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTCACTGAAATGATGACTGCAGAAACTGGAACTTACCGTTGGATGGCACCAGAGCTGTACAGTACCGTGACATTACGTCAAGGAGAGAAAAAACACTACAACAACAAGGTTGATGTGTACAGCTTTGGGATTGTTTTGTGGGAACTTTTAACGAATCGCATGCCTTTTGAAGGGATGTCTAATTTACAAGCTGCTTATGCCGCTGCTTTTAAGCATGAGAGGCCTAGCCTTCCAGAAGATATACCTCCTGATCTGGCCTTTATCATTCAATCATGCTGGGTTGAGGATCCGAACTTGAGACCGAGCTTTAGTCAGATCATCCGTATGCTTAACGCCTTTCTCTTCACTTTGTCGCCTGCGCCACCCTCCCCTAGTTCGCAGGAACCTGAAAATGTTGAACCAGAGGCTTCAGCAACTACAAGTAATGGTGCAATAACTGAGCTTTCTGCCCGAAACAGAGGAAAGTTTGGATTTCTTCGCCATTTGTTCACTTCGAAAAGGACCAAAAACTGA 1131 0.4465 MSYSDRNRGAKERECEESILQNSGELESKSVGQNGSITTPPLTIDENLLVDPKQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSDERAALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPGLLDCQVAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKHERPSLPEDIPPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPAPPSPSSQEPENVEPEASATTSNGAITELSARNRGKFGFLRHLFTSKRTKN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1276 376 PIRSF ILK 9 325 - -
Lele38g1276 376 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Lele38g1276 376 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Lele38g1276 376 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Lele38g1276 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Lele38g1276 376 FunFam Kinase suppressor of Ras 1 44 134 - -
Lele38g1276 376 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Lele38g1276 376 MobiDBLite consensus disorder prediction 326 352 - -
Lele38g1276 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lele38g1276 376 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1276 376 Gene3D Transferase(Phosphotransferase) domain 1 138 353 - -
Lele38g1276 376 MobiDBLite consensus disorder prediction 335 352 - -
Lele38g1276 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 318 - -
Lele38g1276 376 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1276 376 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Lele38g1276 376 Gene3D Phosphorylase Kinase; domain 1 44 134 - -
Lele38g1276 376 CDD STKc_MAP3K-like 61 316 - -
Lele38g1276 376 SUPERFAMILY Protein kinase-like (PK-like) 47 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1276 Lele-ChrLele38 23559549 23562973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1276 43 376 MAP Kinase Kinase Kinase AT5G01850 73.464 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele38g1276 PK_Tyr_Ser-Thr 1.1e-59 CL0016