Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1274 ATGGCCTCTCATAGGTGTTTATCTGTTGTCCTGTATTCTCTGGTGGTTTTAGGTCTTGCAAACACTGCTTTGTCATCAACTTCACTGTCTCCTGATTTCTACGTTCACTCTTGTCCTAAGGCTTTGGAAGCAATCGAAAGAGTCGTTCGGGCTGCAATCTATAAAGAGCGTCGCATGGGCGCTTCTTTGCTTCGCTTGCACTTCCACGATTGTTTCGTTAATGGATGTGATGCGTCGATTCTTCTGGATGATTCGGAGACAATAGATAGCGAGAAGAATGCGAATCCGAATGTGAATTCAGCAAGAGGATTCGAAGTGATCGATGAGATCAAGAGTGAGGTCGACAAAGTATGTGGTGGCCCCCTTGTTTCTTGCGCTGACATCCTGGCTGTCGCTGCTCGAGACTCTGTTGTGGCCTTGGGGGGCCCATCATGGAAAGTGAGACTTGGCAGAAGAGACTCCAAAACGGCAAGCCGTAGCGCAGCAAACGCAGACATCCCAGCACCATTCTTCAGCCTCTCTCAGCTCATCGACAACTTCAAGAACCAAGGCCTCAACGAGAAAGATCTTGTCGTTTTATCCGGTGGCCACACCATTGGCTTCGCACAATGCGCCAACTTCAGAGACCGCATCTACAACGACCCAACTAAGATCGACCCCTCCTTTGAAAAGGACCTTCAGAGGGGCTGCCCTACTAATGGAGGGGACGCCAACCTCGCTCCACTGGACCCCACCGCTGCTCGCTTTGACGTCGCTTACTTCTCCAATTTGCTTCACAACAAAGGTCTTCTAATCTCTGATCAACAACTCTACACTGGTGGCTCTACTGATGAATACGTCAAGAAATACAGCTATGATACTAAAGCTTTCCACAAGGATTTTGCCAATTCCATGATTAAGATGGGGAATATAAAGCCCCTCACTGGTTATCAGGGTGAAATTCGTGGCAATTGCAGGAAGGTTAACTCATATTAA 975 0.481 MASHRCLSVVLYSLVVLGLANTALSSTSLSPDFYVHSCPKALEAIERVVRAAIYKERRMGASLLRLHFHDCFVNGCDASILLDDSETIDSEKNANPNVNSARGFEVIDEIKSEVDKVCGGPLVSCADILAVAARDSVVALGGPSWKVRLGRRDSKTASRSAANADIPAPFFSLSQLIDNFKNQGLNEKDLVVLSGGHTIGFAQCANFRDRIYNDPTKIDPSFEKDLQRGCPTNGGDANLAPLDPTAARFDVAYFSNLLHNKGLLISDQQLYTGGSTDEYVKKYSYDTKAFHKDFANSMIKMGNIKPLTGYQGEIRGNCRKVNSY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1274 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 Pfam Peroxidase 46 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 SUPERFAMILY Heme-dependent peroxidases 29 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 Gene3D - 32 322 - -
Lele38g1274 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lele38g1274 324 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lele38g1274 324 FunFam Peroxidase 167 301 - -
Lele38g1274 324 PANTHER PEROXIDASE 72-RELATED 26 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 Gene3D Peroxidase, domain 2 167 301 - -
Lele38g1274 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 ProSiteProfiles Plant heme peroxidase family profile. 28 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele38g1274 324 FunFam Peroxidase 32 174 - -
Lele38g1274 324 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1274 Lele-ChrLele38 23520743 23521931 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1274 1 322 Peroxidase AT5G05340 55.521 3.24e-123 355