Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1260 ATGTCTTCCCGTTTTGCCCCCCCTTTTCCCACTCTTCGCCATGTCTTCAATTCATTACTTGATTTGTTTAATTGTTGCAGAGTGGTAGAATCGCGTGATAGAGATGGGTTCGATTCTTCAATGCCTTATATACGCGAAATCGTTCTTAGGAAAGAGGGTGACGCTATTATTGATCATGAAAATGAGAAGCAGAATTTCGATGGCAATTGCTCTGTTTTAGGGTATAAACAAGAATTGGTCGCAAAGGCTGAGCCTCTGCTTGCTGAGGAGCCACTGAAACCTTGGATAACATTGAAGAGGAACATAAGGAAGGACAAGTGCCTACCATCAATGGTTGATATCAGCTCTAAGAATAGGTATGTGTATATAGATGTTGGAGCTCGAAGTTATGGCTCTAGTATAGGAAGTTGGTTCAGGAAACAGTATCCAAAACAGAACAAGACCTTCCATGTGTATGCAACTGAAGCTGATAAGACTTTTCATCAAGAGTATGGGTTGAAAAAGGGAATCACGTTGTTACCTTATGGAGTTTGGGTGAAGAATGAGACCTTAACCTTTGAAATCCGTAGAGAGCCTGGTAAGCAAGTGGATGCTAAAGGTAGAGGAATGGGTAGGATTCAACCTCTGCAATTTTCGGGTGACCATGATGGGGAAGTGGAGAAGATCCATGGGTTTGATTTTGCGGAATGGTCGAAGAACACAGTTTCAAAGAATGATTTTGTTGTGATGAAAATGGATGTGGAAGGTGCTGAGTTTGATCTGATTCCGAGGTTATTTGAGACTGGAGCTATCTGTTTGGTAGATGAGATATTTCTGGAATGCCACTATAATAGGTGGCAGAGATGTTGCCCTGGGCAGAGGAGTTCCAAATTTCCTCGAGAAACTTTTTGGGTTCCGACTGCAATTTCGTGGGGTCCCCTTGGTTTTGGAATTACCATCGTTGGGCCTTTCGATATGGGAGGTTGTTGCAGTTGTGAGATTTCTTGTGGAGGCAAGATGATTAGGAACATGGATGATAAAGAATATGATCGCCGAGAGTGCGAAGATATTGCTTATGCAGATTCCGGAGCTCGAATCAGATTAAGAGGTTCCTCTAAGTTTATATCAATGTACTGCCAACAAGGAAGTAAAGGGATTAACCAAGATGCATTAACAGTTTGGGAGGGCTTAAATGGAGAAAAGGGCATGATCTTCTGTGGTGTGTTTGATGGTCATGGTCCTCTTGGACACAAGGTTTCACAATACATACGCGACAATCTTCCCGCAAAACTCTCTGAATCAATCAAAACGACTCAACAGAGGAAGGTCAGCAAACTCTTTGATCCTTATCCTCAAGGAAGAAGCAGCCATGTTAATGTGTCTGGTGAAAATGACCAAAACATGTCCCCTGCTTCATGGGAGCGCAGCCTTGTCAAATCTTTCAATGATATGGATGAAGATGTTTCTCGAGACATCAACACCGACAGCTTTTCCAGCGGTACCACTGCTGTAACTGTAATTCAACAGGGAGACCAGCTGATAATTGCAAATTTAGGAGATTCTCGAGCAGTTCTTTGCACAAGAGGAGATAATGACGAGCTTAATCCTGTTCAACTCACTGTGGACTTGAAACCTGATATTCCAAGCGAAGCCATGAGAATCCAAAATTGTGAAGGTAGAGTTTTCGCTGCAGCAGAAGAATCGCAAGTATACAGAATATATATGCCTGATGAGGACGCTCCTGGACTAGCTATGTCAAGAGCCTTTGGAGATTTCTGCCTAAAAGATTATGGCCTCATCTCAGTTCCTGACGTCTTCCATAGAAAAATAACAGAGCAGGATGAATTTGTAGTGTTGGCAACAGATGGGATTTGGGATGTGCTATCGAATGCCGAAGTGATAAGCATTGTTGCTTCAGCGCCAAGGAGGTCCATGGCAGCAAAACTGTTAGTAAGGCATGCTGTTTCTGTATGGAGACACAGGTATCCTAATGCCAAGATCGATGATTGTGCGGTGATATGCTTGTTCCTGCATGAACCTCCGACTTTACCCGATTCTCCATCTGCTAGGAGCAACCTAAATCAAAGGAAGCAATTCAGTCCCCACTCTAAACCCACTAGAAATGAAGGCACTGAAAGTTGGTTAGATGATGGCCAGAGTTCTATAATAACATTAGGGCAAGAATTGGATGCTCGTTCAAAATTGTCTAGAGCCAACTCTGTGACATATTCAAAATATCCACGACTCTCAACGGTTGTGAGTAGAAAATCTTCTCAGTGCGTTGATGGAGTTGAAGTTCATTAG 2283 0.4288 MSSRFAPPFPTLRHVFNSLLDLFNCCRVVESRDRDGFDSSMPYIREIVLRKEGDAIIDHENEKQNFDGNCSVLGYKQELVAKAEPLLAEEPLKPWITLKRNIRKDKCLPSMVDISSKNRYVYIDVGARSYGSSIGSWFRKQYPKQNKTFHVYATEADKTFHQEYGLKKGITLLPYGVWVKNETLTFEIRREPGKQVDAKGRGMGRIQPLQFSGDHDGEVEKIHGFDFAEWSKNTVSKNDFVVMKMDVEGAEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSSKFPRETFWVPTAISWGPLGFGITIVGPFDMGGCCSCEISCGGKMIRNMDDKEYDRRECEDIAYADSGARIRLRGSSKFISMYCQQGSKGINQDALTVWEGLNGEKGMIFCGVFDGHGPLGHKVSQYIRDNLPAKLSESIKTTQQRKVSKLFDPYPQGRSSHVNVSGENDQNMSPASWERSLVKSFNDMDEDVSRDINTDSFSSGTTAVTVIQQGDQLIIANLGDSRAVLCTRGDNDELNPVQLTVDLKPDIPSEAMRIQNCEGRVFAAAEESQVYRIYMPDEDAPGLAMSRAFGDFCLKDYGLISVPDVFHRKITEQDEFVVLATDGIWDVLSNAEVISIVASAPRRSMAAKLLVRHAVSVWRHRYPNAKIDDCAVICLFLHEPPTLPDSPSARSNLNQRKQFSPHSKPTRNEGTESWLDDGQSSIITLGQELDARSKLSRANSVTYSKYPRLSTVVSRKSSQCVDGVEVH 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1260 760 Gene3D Vaccinia Virus protein VP39 111 278 IPR029063 -
Lele38g1260 760 Gene3D - 361 672 IPR036457 -
Lele38g1260 760 PANTHER METHYLTRANSFERASE 14 292 - -
Lele38g1260 760 MobiDBLite consensus disorder prediction 678 708 - -
Lele38g1260 760 MobiDBLite consensus disorder prediction 447 464 - -
Lele38g1260 760 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 256 IPR029063 -
Lele38g1260 760 CDD PP2Cc 367 670 IPR001932 -
Lele38g1260 760 ProSiteProfiles PPM-type phosphatase domain profile. 367 670 IPR001932 -
Lele38g1260 760 SMART PP2C_4 358 668 IPR001932 -
Lele38g1260 760 Pfam Protein phosphatase 2C 393 648 IPR001932 -
Lele38g1260 760 MobiDBLite consensus disorder prediction 440 464 - -
Lele38g1260 760 SUPERFAMILY PP2C-like 364 673 IPR036457 -
Lele38g1260 760 Pfam Methyltransferase FkbM domain 124 278 IPR006342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1260 Lele-ChrLele38 23397903 23401980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1260 319 674 PP2C-type Phosphatase Gene Family AT5G01700 51.111 1.37e-114 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0206 42 1689067 1695291 Lele38g1260 38 23397903 23401980 CCT
Lele43g1151 43 19892322 19898778 Lele38g1260 38 23397903 23401980 CCT
Lele44g1142 44 20047887 20051627 Lele38g1260 38 23397903 23401980 CCT
Lele41g0210 41 1689072 1690052 Lele38g1260 38 23397903 23401980 CCT
Lele38g1260 38 23397903 23401980 Lele40g1202 40 21883268 21887771 hybridization