Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1240 ATGAATCATCAGACTCTTCTTCAGCCCCCCACCTTGTCTGTTCCCAATGACATAACCTCTGTTTCTGATCCATTCGATCTTCCCTCCACCTTCTTCTTCGAAGATCATTTCCCATATCCAGTTGAAATGGGATCAGAAGCATCCAAATCCATAGAGAATTATTCCCCCTTCAACGAATTTGAAGTTTCTTCTGTCTTCTTCTCTCAAGATAATTTCCAGTACCCAGTTACTGAAGAAGATATTCTGGGAATATCATCCATGGATTGGGATGCTCTTGACCCTGATTTGAGTACCCAGTTTCTGAATATCCACGGATGCCCAGAAGAAAGCTTTCAACTTTCCCAGAATCGTTCTTCTGATGCGGAAGAATCTTGGAGTTCCAGTCCATCCTCTCTTCAACTACCATCGGTGAACTTGCCTCAAGAAAACTTGGAAATGGATACCCAAGTGATTCTTCCGCATCTCCTTGAAGCCCATGTTGAGGCGAGAGATCAGAACCAGAATGCTCTGGTAGAAGAAACCCTGAGATGCATAAACCAGAAAACAAGCCCACTTGCAGAAGATCCTCTGGAGCGCCTAGCATTCCACTATTCCTCCCAAAACATCACAGGAAATCCAGAGGGGTATTTACTCAAGCAGGAGGCGTGCAAAAATGTTGATACTGCATTCAAAGTACTTTACCAAAGCACTCCCCATGGAAGATTTGCTCATTTTGCAGCCAATTCAGCAATTCTAGAAGCCATACCAGAGGATTCAGAAGCTATACACATAATAGACTTCGACATGGGAGAAGGGGTTCAGTGGGCCCCTGTGATAGAGGCCATTTCTCAACAGAACAAGGCGCTGAAGTTGACATCAATCAAATGGGAAACAGAGCAAGAAAACTCCGAGGAACCCGGCACGAACCTTATTGAACACGCAAGATCCTGTGGTCTCAAGATGAAGATAGAAGAAAAGAGTTTTGAGGAATTAGTTACAGAACTCAAGAAATATAACAAAAGAGGTGGGAGTGTGAAGAGAGATTTCCTAATCTTTAACTGCATGGTGGGTCTTGCTCACATGGGGAGAGGAAGAAGCAGAAGATCAGTCATGGAGTTTCTAAATTTGGGCAAGAACCTGACCAACAAGAACACCTGCAACAGGGGAATCATCACTTTTGGGGACGGAGAAGCCGACGACAAACTGAGAAATGGCCTGAGCTTCAGGTCATTCTTTGACGGTAACATGATGCATTACAAGGCATTAATGGAATCAATTGAATCAAGTTTCCCTGCTTGTTTCTCACAAGCAAGAACAGCAATAGAGTTCTTATTCGTGGGACCCTATGTGTCTTCCGATTCTTGGATGAAGAAGTGGGAAGAACTGAGAGGAAATAGCCATTTTCAGGCAGGGAATGGAAGAAGATTAAGCCAAGAGATGTTAATGGAAGCGAGGGAAATGTTGAGAGGAAGCAGGGAGGGGTCATATGAGGCAAGGATTGAGGGGCAAAATGGGAATGAAATGGTTCTCTTATGGAAAGGGACACAGCTAGTCAAAGTATCAACTTGGGGAAGTCAAAAGGCCTGA 1566 0.4413 MNHQTLLQPPTLSVPNDITSVSDPFDLPSTFFFEDHFPYPVEMGSEASKSIENYSPFNEFEVSSVFFSQDNFQYPVTEEDILGISSMDWDALDPDLSTQFLNIHGCPEESFQLSQNRSSDAEESWSSSPSSLQLPSVNLPQENLEMDTQVILPHLLEAHVEARDQNQNALVEETLRCINQKTSPLAEDPLERLAFHYSSQNITGNPEGYLLKQEACKNVDTAFKVLYQSTPHGRFAHFAANSAILEAIPEDSEAIHIIDFDMGEGVQWAPVIEAISQQNKALKLTSIKWETEQENSEEPGTNLIEHARSCGLKMKIEEKSFEELVTELKKYNKRGGSVKRDFLIFNCMVGLAHMGRGRSRRSVMEFLNLGKNLTNKNTCNRGIITFGDGEADDKLRNGLSFRSFFDGNMMHYKALMESIESSFPACFSQARTAIEFLFVGPYVSSDSWMKKWEELRGNSHFQAGNGRRLSQEMLMEAREMLRGSREGSYEARIEGQNGNEMVLLWKGTQLVKVSTWGSQKA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1240 521 Pfam GRAS domain family 154 516 IPR005202 -
Lele38g1240 521 Coils Coil 314 334 - -
Lele38g1240 521 MobiDBLite consensus disorder prediction 111 136 - -
Lele38g1240 521 ProSiteProfiles GRAS family profile. 143 517 IPR005202 -
Lele38g1240 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 510 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1240 Lele-ChrLele38 23295550 23297115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1240 158 516 GRAS Transcription Factor Family AT5G66770 25.000 1.61e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele38g1240 GRAS 2.8e-37 CL0063