Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1239 ATGGAGTGCTTAGACCTCGCTTGTGGGAGAAGGCAAGTAGAAGTCATAACACTTAAAACACATATCCCAAGGAAACGGGAAACCTCTTGCAAACTTCAGCTTGGCGATCAGAAAGTGAAGAAGAACAAGTCCTCTTGGGCGTTGCATAACTCATTGCTGTGTGAGCTTTCCGTGTTTAACTTGCAGAATAATCAATCTATCATGGCAGCATCATCATCGTTAACACTTGGCTTTCTTCTCCATCTGATTCTTCTTTCCCTTCTAGTTGCAGCCAAGGCTCAAGCAGTGAACCAGTTTTCCTTTGTGTATGAGGAGGGATTCGATAATGGGAGCATAGTCACTCAGGAAGCTGCACGATTTACGACCGACCGTATGCTTCAGCTCACCGACACATCCAACAATATTGTAGGCCGTGCTTTCTATTCCAAAAGCATTCAAATGCTTAACAATTCAGACCAACCACAAAAAGCTTCTTCCTTTAGCACACACTTTGTTTTCTCAATCGTCCCCTCAACCACTGCTCCCGGCGGCTTTGGCCTTGCTTTCGTCCTAGCACAAAATATCTCCGTGTTTCCAGAAAATCAACAGGGGCAAAATCTTGGTATTTATGGTGCCAATGAGACGAGCATATTCGCAGTGGAATTTGATACGGTGAAAGGCTTCGAAAAAGGTGAGGCTGACACAGAAGGGAACGATGTTGGGATCATGATCAATGGCACAGACTCAGGTGACTCTAAACCAGCTGCTTACTTTGGGACGGATTCTCAATTGGTTAATTTCAGTATGGAGCAATCTGACGCTGTACAAGCTTGGATAGATTATGATGGTGACAAGAGAATCGTGAATGTGACCGTAGCTCCATTATCTGTGCCTAATAAACCTTCCAAACCACGTATATCAAATCGTCCCACTGGAATGGAGCTAACCGAACACATGTATGTCGGTTTCTCAGCATCAACAGGGGGGGCAAGTAAAGCAAGCTCTCATTACATTCTGGGGTGGAGCTTTGCAGTCAATGAAGCTGCTCGTTCGCTTAACCTTTCCAACCTTCCACGTCCACCACCAAAAGTGAAAGATAATTCCTCTTTTCCTTGGGTCAAATTGGCCATAGGAGTTTTGTCTGCTTTAACCTTGATATTGTTGCTTTCTTTGTGTTCTGTAACATTGTACAAGAAGTACAATCATTTTGAAGCTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAAAGATCTTCACATATCAACGAAAGGAAAGGCATCCCCAAGCTCTGATGTGTATGCTTATGGGGTCTTACTTCTTGAAGTGGTTAGTGGGAGGAGACCTATTGGGTCAGAACAATTCTTTTTGGTGGATTGGGTTGTGGAGAATCACAATATGGGTCAGATTCTTGAAGTGGTTGATCCAAAGTTGGGATCAGATTATGTTGAGGAAGAGGTAGAATTGGTTCTGAAACTGGGTCTTGTCTGTGCTCAGCATCACGCAGATTCAAGGCCAACCATGAGACAAGTGATAAGAATTGTCAATGCACGACAAGTTATGTTGACATGCATGCATGCAGGATTAGTTAGTCAGCTGGTTCTGTTAGAATCTGTTATAGGTACAAATACAATTTATATATATCATCGAGTTTTTGTTCTTGTTGATGTCTATGCACGTACGAGAATTCATTCTCTGTCTTGGCCAATTCATCCACCTCCTAGTCCTATAAAGCAATAA 1728 0.43 MECLDLACGRRQVEVITLKTHIPRKRETSCKLQLGDQKVKKNKSSWALHNSLLCELSVFNLQNNQSIMAASSSLTLGFLLHLILLSLLVAAKAQAVNQFSFVYEEGFDNGSIVTQEAARFTTDRMLQLTDTSNNIVGRAFYSKSIQMLNNSDQPQKASSFSTHFVFSIVPSTTAPGGFGLAFVLAQNISVFPENQQGQNLGIYGANETSIFAVEFDTVKGFEKGEADTEGNDVGIMINGTDSGDSKPAAYFGTDSQLVNFSMEQSDAVQAWIDYDGDKRIVNVTVAPLSVPNKPSKPRISNRPTGMELTEHMYVGFSASTGGASKASSHYILGWSFAVNEAARSLNLSNLPRPPPKVKDNSSFPWVKLAIGVLSALTLILLLSLCSVTLYKKYNHFEALEDWELDCPHRFRYKDLHISTKGKASPSSDVYAYGVLLLEVVSGRRPIGSEQFFLVDWVVENHNMGQILEVVDPKLGSDYVEEEVELVLKLGLVCAQHHADSRPTMRQVIRIVNARQVMLTCMHAGLVSQLVLLESVIGTNTIYIYHRVFVLVDVYARTRIHSLSWPIHPPPSPIKQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1239 575 SUPERFAMILY Protein kinase-like (PK-like) 421 512 IPR011009 -
Lele38g1239 575 CDD lectin_legume_LecRK_Arcelin_ConA 99 339 IPR001220 GO:0030246
Lele38g1239 575 Gene3D - 95 341 - -
Lele38g1239 575 Pfam Legume lectin domain 100 350 IPR001220 GO:0030246
Lele38g1239 575 Gene3D Transferase(Phosphotransferase) domain 1 404 523 - -
Lele38g1239 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 99 356 IPR013320 -
Lele38g1239 575 PANTHER - 420 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1239 Lele-ChrLele38 23280861 23286359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1239 412 515 Receptor kinase-like Gene Family AT3G08870 46.154 3.10e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele38g1239 Lectin_legB 2e-56 CL0004