Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1238 ATGGCTTCATCATCATCATCACCACCATCAGTGCTTGGTTTCCTCCTCCTCCTCCTCTTTCTTTCTCTTCTGGTTGCATCCAAGGCTAAACAAGATACCCATTTTTTATTTGAGGGATTCAACAACAGTGAAAATTCTCTACACCTAGAAGGAGCTACAGTTGTCAAACCCAGTGGTTCGCTTAAACTCACCAACAGATCATACAATATTGTAGGCCATGCTTTCTATTACAGACCCTTTCAGATGCTTAATACAACCAATACAACCAAGCGTAAAGTTTCTTCCTTTAGCACAACCTTTGTTTTCTCCATTGTCCCTTCAGCTTCTGGCCCTGGAGGTTTTGGCCTCGCTTTCGTCATAGCTCCTTCAACTCAATTTCCATGGTCAAGCCCTGGCCATCTTCTTGGTCTCGTTAACTCCTCCAATGATGGGAATTCTTCAAATCACCTTTTTGTAGTTGAATTTGATACGGTTAATGGCTACAGAAGTGAGGCTGACAGTAAAGGGAACCATGTTGGGGTCAATAACAATGGCATGAACTCAATCGTCAATGAACCAGCTGCTTATATTAAAGAAGGCACCGAAGCTCAGAAGGAAGAATTCAGCATGGAGGAATCTGAAGCTGTTCAAGCTTGGATAGATTATGATGCTGACGAGAAAATTGTGAACGTGACTGTAGCTCCTATATCATTGGCTATTAAACCCTCCAAACCACTCATATCTCATACGATTGATCTTCAGGAGGTTCTGAAGAACACCATGTTTGTTGGTTTCTCAGCTTCAACTGGGGAAAGTAAAGCAAGCTCCCATTACATTCTGGGATGGAGCTTTTCAATTAATGGTCCTTCTGCCGCACTCAACCGTTCAAAGCTTCCAGAGCCACCACCAAAGGAGAAAGATCCAAGTTCATCTTCTTTCCATTGGGTCAAACTTGCCATTGGAGTTCTATCTGCTATAATCATAATATTGTTGGTTTCCTTGTGTTCAGTAACATTGTACAGGAGGTACACCAATTATTTCGAGACTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCATGTAGCAACAAAAGGATTTAAAGAGAGTGAGATGATAGGAATTGGAGGTTTTGGTGCAGTGTACAAAGGCATCTTGCCTTCGACAGGAACCGAGGTTGCTGTGAAGAGGATTGTGCGGGGTCGAATCCAAGGAATGAGGGAATTTGCAGCTGAGATCGAAAGCCTAGGAAGATTAAGACATAAAAACTTGGTCAATCTTCAAGGATGGTGTAAACGAAAGAATGATCTTCTTCTGGTGTATGATTACATCTCCAATGGAAGCCTTGACTCACTCATCTTCAATCCAAGCATTGTTCTGAGCTGGGATCAAAGGTTCAATATCATCAAAGGCGTAGCAAATGGGCTATTATATCTGCATGAAGAGTGGGAACAAGTAGTGATTCACAGGGATATCAAAACAGGAAATATTCTCATAGATGAAGATTTAAATGCTCGTGTTGGTGATTTTGGGCTTGCAAGGTTATATGATCATGGCGAAGTTTCTCACACAACCAATGTGGTTGGGACAATTGGGTATATAGCGCCAGAATTAACTCGTACAGGGAAAGCATCCACAAGTTCTGATGTGTATGCTTATGGGGTTTTGCTTCTTGAAGTGGTTAGTGGGAGGAGACCTATTGATCGGTCAGGGCAGTTTTTCTTGTTAGATTGGGTTGTAGAGAACCAAAGCTTGGGCCAGATTCTTGAAGTTGTTGATCCAAAGTTGAATTCAAATTATGATGAAGAAGAGGTGGGATTGGTTCTGAAACTCGGGCTTCTCTGTGCTCAAAACAGAGCAGATTTGAGACCAACCGTGAGACAAGTGACAAGATATCTGAACTTTGATGATCCTGTTCCAGTTATTGGGGATTGGAGGGGACAGATTAATTCTGGAGGTACGAGCTCAGGTTTTCTGGAAATTGTGCCTGCAAGTAGTACAATCTCAACTTCGTATAACTTATCCTCCATTAATAGCATCAGTAGTAGGCGTATAGAAGCTGGTAGGTAG 2067 0.4214 MASSSSSPPSVLGFLLLLLFLSLLVASKAKQDTHFLFEGFNNSENSLHLEGATVVKPSGSLKLTNRSYNIVGHAFYYRPFQMLNTTNTTKRKVSSFSTTFVFSIVPSASGPGGFGLAFVIAPSTQFPWSSPGHLLGLVNSSNDGNSSNHLFVVEFDTVNGYRSEADSKGNHVGVNNNGMNSIVNEPAAYIKEGTEAQKEEFSMEESEAVQAWIDYDADEKIVNVTVAPISLAIKPSKPLISHTIDLQEVLKNTMFVGFSASTGESKASSHYILGWSFSINGPSAALNRSKLPEPPPKEKDPSSSSFHWVKLAIGVLSAIIIILLVSLCSVTLYRRYTNYFETLEDWELDCPHRFRYRDLHVATKGFKESEMIGIGGFGAVYKGILPSTGTEVAVKRIVRGRIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLVYDYISNGSLDSLIFNPSIVLSWDQRFNIIKGVANGLLYLHEEWEQVVIHRDIKTGNILIDEDLNARVGDFGLARLYDHGEVSHTTNVVGTIGYIAPELTRTGKASTSSDVYAYGVLLLEVVSGRRPIDRSGQFFLLDWVVENQSLGQILEVVDPKLNSNYDEEEVGLVLKLGLLCAQNRADLRPTVRQVTRYLNFDDPVPVIGDWRGQINSGGTSSGFLEIVPASSTISTSYNLSSINSISSRRIEAGR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1238 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Lele38g1238 688 SUPERFAMILY Protein kinase-like (PK-like) 350 634 IPR011009 -
Lele38g1238 688 Gene3D Phosphorylase Kinase; domain 1 351 442 - -
Lele38g1238 688 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1238 688 CDD STKc_IRAK 372 633 - -
Lele38g1238 688 CDD lectin_legume_LecRK_Arcelin_ConA 33 281 IPR001220 GO:0030246
Lele38g1238 688 FunFam L-type lectin-domain containing receptor kinase S.4 443 643 - -
Lele38g1238 688 ProSiteProfiles Protein kinase domain profile. 366 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1238 688 FunFam Lectin-domain containing receptor kinase VI.3 351 442 - -
Lele38g1238 688 Gene3D Transferase(Phosphotransferase) domain 1 443 636 - -
Lele38g1238 688 SMART serkin_6 366 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1238 688 Gene3D - 30 287 - -
Lele38g1238 688 FunFam L-type lectin-domain containing receptor kinase V.9 32 282 - -
Lele38g1238 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 296 IPR013320 -
Lele38g1238 688 PANTHER - 26 634 - -
Lele38g1238 688 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Lele38g1238 688 Pfam Legume lectin domain 33 292 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1238 Lele-ChrLele38 23278652 23280811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1238 35 656 Receptor kinase-like Gene Family AT5G01560 51.027 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele38g1238 Pkinase 4.6e-49 CL0016