Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1216 ATGAGAACAATGAGCTCCAATTCATTGGCAAAATCGCGTAACGTAGCAGCAAGCCTAATTGCTTACAGGAATTCTGCTCCGGAGCTCTGTGTCGTCATCAAGGTGGAGAGCATCCAAGAAGAAATGGTTGAGGGTGGAGTATTGGTGACTGCTTTTTCTTACAACCAATCAAAGAATATCCAGCTTTCTTGCACAGGTCGTCTTCTTCATGATATGATCTCTGTTTCTGATGTGTTAGTTACTGAGGAATGTAAGGGAATTAACGGTGTGATTGGTTTGCAATTTATATCAACCATGCCTTGCCCTTCAGCCTCTGGAACTGACTTAATTTTGTGTTTGCAAGTGAGAGTTGGAATTTCTGATGGCTATAACTGCAAGTTTACTATGACTGATGCAAATGCTGCTTCATTTGAGGCGTTTCTTCGAGAATGGATGCTGCGGCAGAAGGATTTGCTAGATGAGCTCGTCTCTGCTCAGCGACGCCACGACGAATTGCACGACGATGATTACAGAGAGTTGATTTCTCGGGTGCTTTCTCACTACGAGCGATACTACCAAGAGAAATCCAGGATCGCTAACCGCGACATTCTCCTCGCTTTCTCTCCCTCGTGGTTCAGCTCTCTGGAACGATCCTTTCTCTGGATCGCGGGATTCAAGCCGGGGATGGTGATTCAGCTTGCGAATCATGTTTTGGATGATCTTTCGGAAGAACAGAGGGAGAGAATGAGTGAGCTCAACCAGGAGACGAGGTCCGAAGAGCGAGCGCTTAACGATGAGTTGGCGAAGATTCAGGAGAGCGTGGGAGCGTCGCCGCTGGTGGAGGCGGCGAGAAGCCATGGGCGATCGTGTTTGAGTGAGTCGCATAGAGCAGAGGAGGGTGGTGGTGAAGTACAGGAGACACTGAAAATTGCGTTGGAGAATTTGGTGGTGAATGCAGACACGTTGAGGATGAACACGGCGTTGAAGATGGTGAAGATATTGAAGCCATATCAGGCTGTGAATGTGCTGGTGGCTGTGGCTGAGCTTCACATCAGGATTCGAACGTGGGGTCTGGAAAAAGACGCTCATCAGGGTGGTGCAGATTGA 1086 0.4834 MRTMSSNSLAKSRNVAASLIAYRNSAPELCVVIKVESIQEEMVEGGVLVTAFSYNQSKNIQLSCTGRLLHDMISVSDVLVTEECKGINGVIGLQFISTMPCPSASGTDLILCLQVRVGISDGYNCKFTMTDANAASFEAFLREWMLRQKDLLDELVSAQRRHDELHDDDYRELISRVLSHYERYYQEKSRIANRDILLAFSPSWFSSLERSFLWIAGFKPGMVIQLANHVLDDLSEEQRERMSELNQETRSEERALNDELAKIQESVGASPLVEAARSHGRSCLSESHRAEEGGGEVQETLKIALENLVVNADTLRMNTALKMVKILKPYQAVNVLVAVAELHIRIRTWGLEKDAHQGGAD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1216 361 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 136 358 - -
Lele38g1216 361 Coils Coil 148 168 - -
Lele38g1216 361 Pfam Seed dormancy control 152 226 IPR025422 GO:0006351|GO:0043565
Lele38g1216 361 Coils Coil 228 266 - -
Lele38g1216 361 ProSiteProfiles DOG1 domain profile. 134 356 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1216 Lele-ChrLele38 23133470 23138737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1216 135 347 Calmodulin-binding Proteins AT1G77920 30.986 1.67e-21 92.8