Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1206 ATGGGCGTCGATTACTACAAGATTCTTCAGGTAGACCGAAGCGCCAACGACGATGATCTCAAGAAAGCCTATCGAAAGCTTGCCATGAAGTGGCATCCTGATAAAAACCCTAACAACAAGAAAGAGGCTGAAGCTAAATTCAAGAAAATATCTGAGGCTTATGATGTTTTGAGTGATCCACAAAAGCGAGCGTTGTATGATCAGTTTGGTGAGGAGGGGTTGGATGGGCAGGTATCGCCACCCGGCGCTGGCGGGTTTAACGGTGGACCAACGACGTTTCGGTTCAACCCGAGAGATGCGGATGATATATTTTCGGAGTTATTTCGGTTTTCCCACCCGTCTGGTGGTGCTGGCGGGTCCACTTTTCAACAGGGTGTGTTTAGCGATGATGTTTTTGCTTCCTTTGGGAATGGAGGGGGACATGGCTCAGAGAACATGCCAAGGAAAGCTGCAGCTATGAAGCGAACGCTGCAATGTTGTTTGGTGAATTTGTATAAAGGAACTACAAAGAAACTGAAGATTTCGAGAGATGTTCTAGATGCCACTGGCAAGAGTGGAGATTATATATTTAGTTACATTGTATTTTTATTCGCTTGGTCATGTGCATCCAAGCTTGGACTGGTGGACCCCACTGCCAAGCAAACAAGTAATTTCATTTGTGTTGGGCGAATGCAAATGCTTCTGGAGATAAGGTTGGCTTCAGTAAGGAAGCACATCTTTGTGCCATTCTGCTCTACTAGAGCTTTCTACCTATATGGAGACAATATGTTGTGCCAGTTGTTTCAATTCCGAACTTTGAATATAAATTGGCTTCACAGTGAAAAGGCAAGATTGGCTATGGAACTATGGTCCGTGAAATTACTTGTGATTATGATTACCGAAACTACTATGTTTTTGAGCAGGAAGCCAACCTCAGTAGAGGAAATTCTTACATTTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGAGAAGGGAAATGAACAGAGAGGTGTTATACCTGCAGACCTTGTCTTAATCATTGATGAGAAACCTCATAGTGTTTTCAAGAGGGACAACAATGATCTTATTGTCACCCAGAGGATAGCTCTGGTCGAAGCCCTGACAGGTTATGTGGCACAGCTGACTACCCTTGATGGCCGGAATCTTACTATACCTATCAACTCAATCATTAGTTCCTCATATGAAGAAGTTGTTGAAGGAGAGGGCATGCCTATTCCCAAAGAACCCTCCAGAAAGGGTAACTTGAGAATCAAGTTCGATATCAAGTTCCCTTCCGGACTCACATCAGAGCAGAAAATTGCCTTTAAGAAACTATTGACATCATCATAA 1344 0.433 MGVDYYKILQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKKISEAYDVLSDPQKRALYDQFGEEGLDGQVSPPGAGGFNGGPTTFRFNPRDADDIFSELFRFSHPSGGAGGSTFQQGVFSDDVFASFGNGGGHGSENMPRKAAAMKRTLQCCLVNLYKGTTKKLKISRDVLDATGKSGDYIFSYIVFLFAWSCASKLGLVDPTAKQTSNFICVGRMQMLLEIRLASVRKHIFVPFCSTRAFYLYGDNMLCQLFQFRTLNINWLHSEKARLAMELWSVKLLVIMITETTMFLSRKPTSVEEILTFEIKPGWKKGTKITFPEKGNEQRGVIPADLVLIIDEKPHSVFKRDNNDLIVTQRIALVEALTGYVAQLTTLDGRNLTIPINSIISSSYEEVVEGEGMPIPKEPSRKGNLRIKFDIKFPSGLTSEQKIAFKKLLTSS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1206 447 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lele38g1206 447 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lele38g1206 447 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lele38g1206 447 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lele38g1206 447 FunFam DnaJ subfamily B member 13 3 118 - -
Lele38g1206 447 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 444 - -
Lele38g1206 447 SUPERFAMILY HSP40/DnaJ peptide-binding domain 352 437 IPR008971 GO:0006457|GO:0051082
Lele38g1206 447 FunFam DnaJ subfamily B member 13 350 430 - -
Lele38g1206 447 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lele38g1206 447 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lele38g1206 447 SMART dnaj_3 3 62 IPR001623 -
Lele38g1206 447 SUPERFAMILY Chaperone J-domain 3 91 IPR036869 -
Lele38g1206 447 Pfam DnaJ domain 4 67 IPR001623 -
Lele38g1206 447 Gene3D DnaJ domain 3 118 IPR036869 -
Lele38g1206 447 SUPERFAMILY HSP40/DnaJ peptide-binding domain 156 350 IPR008971 GO:0006457|GO:0051082
Lele38g1206 447 Gene3D - 350 430 - -
Lele38g1206 447 CDD DnaJ_C 293 432 - -
Lele38g1206 447 Gene3D - 142 349 - -
Lele38g1206 447 CDD DnaJ 4 59 IPR001623 -
Lele38g1206 447 Pfam DnaJ C terminal domain 155 429 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1206 Lele-ChrLele38 23047522 23049631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1206 5 67 C2H2 Transcription Factor Family AT1G74250 38.806 5.88e-09 56.2