Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1204 ATGGTGGGAAAGATAGACGCCACTTCGCGGGAAAAGCTCGCGAGTCTTGTAAACTCCGTCAAGTTGGCCATGGATATACCCTCCAAGCTCGATTACTTGCGGCAACTGAAGCTAGAGTGGCCTCAGGAAGACCCCGTTTTGCTCACCGAGTTTCTTCCTTGTCTCTTCGAGTTTCGGTCTGACCGTTTCAGTCCAGTTCGCAAATTTGTCACCGAGATGCTTGGTGAAATTGGATCTAAAAACATGGAGTTCTTGCCTGACATTATGCCTTTTCTCCTTGCTGTTTTGGATGATGATACACCTGCTGTTGTTCGTCAAGCTATATCGTGTGGAATTAATTTATTTCATTCCACTCTTGGGAAAATTGCAATACAGGGTCTATACTCCAGTGATCTGGACGGTGCACTTGAATCTTCATGGGCATGGATGGTAAAGTTCAAAGACAAAGTATACTCGCTTGCTTTTCAACTTGGTAGTGGTGGTACAAAGTTGCTGGCACTGAAGTTTGTTGGAGCAGTTATTCTTCTATACACACCAGATCCAAATGGTTCCTCAGAGGCCCCTCCTCATCAAGGAAGGCTTATGGAGTTTAACATATCACGGATTCGCAAGGGTCATCCCGTACTCAACTTTAAAGATTTGTCAATGGATGCTAGTCGTAGTTTGGGTCTCCTGCTTGATCAACTCAGGTTTCCAACAGTAAATTCTCTCAGTAACTCAGTGATTGTTGTGCTAATTAACAGCCTTTCAGCAATTGCAAAAGATAGGCCTACATTCTATGGCCACATTTTGCCAGTTTTGCTTGGTTTGGCATCATCAAGCTCTGTTGTTAATGGGATCTGTGTAACAGCAGTACATCATGCGTTGAAAAAGGCCTTTCTCACTTGCTTGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGAACGTTTGGCAGGTGCCTTGGATGAAATGCAGTCTGAAGGGATGGCAGATCAGGTGTTCCACCGAGTTTCTGAGATAAATGGAAGTATAAAGAAAGAGAAAGATGATGATCTAGATATTAAGGATGGAAGTGATTTAGCTGAAGATGATGTTCCTGAAAAACGTGTCAAAACAACAACCATTGTCTCAGAACCTAAGAAAGAGTTAGATGGAAGCACAACAGTGTCTCAATACAGCAATGCAACTGCACCACTTTCATCAAAAAGAGAAGTGGATAATGGGCCTGTTCAGCAACTTGTTGCAATGTTTGGTGCTTTGGTTGCTCAGGGTGAAAAAGCTGTCGCATCTTTGGAGATTCTTATCTCAAGTATCTCCTCAGACTTGCTAGCCGAGGTGGTAATGGCTAATATGTGTAACCTGCCTCCAAACAATCCAAGTGCTGAAGGAGATGATGAGCCACTGCATGACATCAGGATAATAGGTTCTTGTAGAAGAGAAATTAGTGGGATTCATTGA 1440 0.434 MVGKIDATSREKLASLVNSVKLAMDIPSKLDYLRQLKLEWPQEDPVLLTEFLPCLFEFRSDRFSPVRKFVTEMLGEIGSKNMEFLPDIMPFLLAVLDDDTPAVVRQAISCGINLFHSTLGKIAIQGLYSSDLDGALESSWAWMVKFKDKVYSLAFQLGSGGTKLLALKFVGAVILLYTPDPNGSSEAPPHQGRLMEFNISRIRKGHPVLNFKDLSMDASRSLGLLLDQLRFPTVNSLSNSVIVVLINSLSAIAKDRPTFYGHILPVLLGLASSSSVVNGICVTAVHHALKKAFLTCLKCTHPSAAPWRERLAGALDEMQSEGMADQVFHRVSEINGSIKKEKDDDLDIKDGSDLAEDDVPEKRVKTTTIVSEPKKELDGSTTVSQYSNATAPLSSKREVDNGPVQQLVAMFGALVAQGEKAVASLEILISSISSDLLAEVVMANMCNLPPNNPSAEGDDEPLHDIRIIGSCRREISGIH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1204 479 Pfam Symplekin/PTA1 N-terminal 101 317 IPR032460 -
Lele38g1204 479 Gene3D - 2 345 IPR011989 -
Lele38g1204 479 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 470 - -
Lele38g1204 479 SUPERFAMILY ARM repeat 45 274 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1204 Lele-ChrLele38 23027246 23032568 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1204 38 23027246 23032568 Lele42g0139 42 1107207 1115105 CCT
Lele38g1204 38 23027246 23032568 Lele44g1212 44 20611651 20614830 CCT
Lele38g1204 38 23027246 23032568 Lele39g0101 39 681991 698553 hybridization
Lele38g1204 38 23027246 23032568 Lele40g1145 40 21518048 21522076 hybridization