Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1160 ATGCATCTTTCCTTCGAAATGGGGATGCAAGAAAAAGAAATGCGGAAGCATTCTACTGTAGCGAATGTTGCTTGGCGCTTAATGATTGTCGCTATGGACTTGAATGCCTCACCGGTGCCCGAGGAAGATGAGGATATTTTTGAGAGACATATAGAACAGTATATCCAACCAGAAGAACGCATAGAAACTGCAGTTGATATAGCACGTCGGGAGCGTGAAGAAAGGAAAAGACGGTTGAAAAGAGAACGGACAGATGATAGACCTGCCCATGTATCACAGTCAACAACTGGTTATGATCAGACCTTTAATGCAAAGTCTCTTAAGTCATATGATAAAAGTAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGTCAGGAAATATATTGCTTGATACCTTCCAAGGTTCCACTTGGTGAATCATTCAATGATTGTATTGCTCCTGGTCGAAGATACTCATTTAAACAAGTGATACATCAACAAAGAGTTCTAGGGAGAAAACTTGGTTTGGTGATTGATCTGACAAATACTACTCGTTACTATCCAGTTTCAGATCTGAAGAAAGAGGGTATCAAGCATATTAAGATTCAATGCAAGGGACGTGATTCTGTACCTGATAATTTGTCTGTGAATCAATTTGTCCACGAGGTTACTCAATTTCTATCACGTCAAAAACAAGCGAAGAAGTATATACTTGTCCATTGTACACATGGACATAATCGTACTGGGTACATGATTGTTCATTATCTTATGCGCTCTATGCCTATGTCTGTCACCCAGGCAATAAAAATATTTTCTGAAGCACGCCCCCCAGGAATTTATAAACCTGATTATATTGATGCTTTGTACACCTTTTATCACGAAAAAAAGCCTGAAATGGTAGTTTGTCCTCCTACACCAGAGTGGAAGAGATCCTCTGAATTTGATCTCAATGGAGAAGCAATGCCAGATGATGATGATGATGGAGTGCCAGACCCTCCTCATGAGAACCATGAGACAGATGCAATAATGACAAACGATGATGTTTTGGGAGATGAAATACCTGTTGATCAACAAGATGGATTTCGACAGTTCTGTTATCAGTCTCTTAAATTGAATTTTGGGGGTAGAGGACACACACATTTTCCAGGTTCACACCCAGTTTCTCTTAATAGGGAAAATTTACAATTATTACGGCAGCGTTATTATTATGCAACATGGAAAGCTGACGGAACAAGATATATGATGCTAATAACTATGGATGGATGTTACTTGATTGATAGAAGTTTCAATTTCCGAAGGGTGCAAATGAGGTTTCCTTGCAGAGGCTCAAATGATGGTTTGGCTGAGAAGACCCACCACTACACATTGCTTGATGGGGAGATGATCATTGATACGTTGCCTGATTCACAGAAACAGGAGAGGAGATACCTCATATATGATATGATAGCTATTAACCATGTATCAGTAATAGAGCGACCGTTCTATGAACGGTGGAAGATGCTTGAGAAAGAGGTGATTGAACCTAGAAATCAGGAACGGCATAATACATACCAGAGCAGAAATCCTTATTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACCGTCAATAAGCTTTTAAATGAATTCATTAAGAAACTCTCACATGATGCGGATGGCCTCATATTTCAGGGTTGGGATGATCCTTATATACCCCGCACTCATCAAGGCCTCCTGAAGTGGAAATATCCTGAGATGAATTCAGTCGATTTTCTCTTTGAGATTGATGATGATCGCCAGTGTCTTTTCCTTCATGAACGAGGAAAGAAGAAACTCATGGAAGGGAATAGGGTTGCATTCAAAGATGGTTCAGATCCCTTGCTTTATTCGGGGAAGATTATAGAGTGTTCTTGGGATATAAATGAACAGGAATGGGTATACATGCGAACCAGGACAGATAAATCAACTCCAAATGATTTTAACACTTACAGGAAGGTTATGCGGAGTATAAAAGACAACATCACAGAGGATGTCTTGTTGAATGAAATTTATGAGATAATTCGCCTTCCAATGTATGCTGACCGGATAAAAAATGACAGCAAAGCCCACCATCAAACTGGAGCAGCACGCCGGAGGTGA 2127 0.4034 MHLSFEMGMQEKEMRKHSTVANVAWRLMIVAMDLNASPVPEEDEDIFERHIEQYIQPEERIETAVDIARREREERKRRLKRERTDDRPAHVSQSTTGYDQTFNAKSLKSYDKSRLPPGWLDCPSFGQEIYCLIPSKVPLGESFNDCIAPGRRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKEGIKHIKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQAKKYILVHCTHGHNRTGYMIVHYLMRSMPMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAMPDDDDDGVPDPPHENHETDAIMTNDDVLGDEIPVDQQDGFRQFCYQSLKLNFGGRGHTHFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVSVIERPFYERWKMLEKEVIEPRNQERHNTYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLNEFIKKLSHDADGLIFQGWDDPYIPRTHQGLLKWKYPEMNSVDFLFEIDDDRQCLFLHERGKKKLMEGNRVAFKDGSDPLLYSGKIIECSWDINEQEWVYMRTRTDKSTPNDFNTYRKVMRSIKDNITEDVLLNEIYEIIRLPMYADRIKNDSKAHHQTGAARRR 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1160 708 FunFam mRNA capping enzyme family protein 111 325 - -
Lele38g1160 708 MobiDBLite consensus disorder prediction 72 98 - -
Lele38g1160 708 CDD RNA_5'-triphosphatase 118 284 - -
Lele38g1160 708 ProSiteProfiles ATP-dependent DNA ligase family profile. 462 606 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Lele38g1160 708 ProSitePatterns Tyrosine specific protein phosphatases active site. 234 244 IPR016130 GO:0016311|GO:0016791
Lele38g1160 708 MobiDBLite consensus disorder prediction 310 333 - -
Lele38g1160 708 SUPERFAMILY Nucleic acid-binding proteins 581 694 IPR012340 -
Lele38g1160 708 FunFam mRNA capping enzyme family protein 577 685 - -
Lele38g1160 708 Gene3D Protein tyrosine phosphatase superfamily 89 310 IPR029021 -
Lele38g1160 708 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 115 304 IPR029021 -
Lele38g1160 708 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 281 IPR000387 GO:0016311|GO:0016791
Lele38g1160 708 Pfam mRNA capping enzyme, C-terminal domain 583 676 IPR013846 -
Lele38g1160 708 FunFam mRNA capping enzyme, putative 339 576 - -
Lele38g1160 708 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 341 579 - -
Lele38g1160 708 ProSiteProfiles Dual specificity protein phosphatase domain profile. 142 293 IPR020422 GO:0006470|GO:0008138
Lele38g1160 708 SMART dsp_5 149 289 IPR020422 GO:0006470|GO:0008138
Lele38g1160 708 Gene3D DNA ligase/mRNA capping enzyme 339 578 - -
Lele38g1160 708 Pfam Dual specificity phosphatase, catalytic domain 167 287 IPR000340 GO:0008138|GO:0016311
Lele38g1160 708 PANTHER MRNA-CAPPING ENZYME 110 690 - -
Lele38g1160 708 PIRSF mRNA_capping_HCE 101 708 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lele38g1160 708 CDD Adenylation_mRNA_capping 369 579 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele38g1160 708 Gene3D - 579 670 IPR012340 -
Lele38g1160 708 Pfam mRNA capping enzyme, catalytic domain 380 578 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele38g1160 708 MobiDBLite consensus disorder prediction 72 89 - -
Lele38g1160 708 Coils Coil 65 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1160 Lele-ChrLele38 22674451 22695250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1160 28 708 Protein tyrosine phosphatase (PTP) family AT3G09100 70.930 0.0 969