Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1103 ATGGCCACCCTTCTTCTCCAACTCTCCTCTGTTTTCCTCTTCCTTCTGTTTCCTGTGTCTTCTCAGCTTGACGAGGTTTTCTTCCCCGGCTTTAAGGGTGTCGGAAACAACATAACCCTGAACGGTCTAGCAGAAATCGAGAAAAATGGAATCTTGCGGTTGACGAACCAGACAAGTAGACTAATGGGTCATGCTTTTTATTCTTCTCCATTCCAGTTCAAGAACTCGTCTTCTGGTAAAGCCTTCTCCTTCTCTGCTTCTTTTGCTCTCGTCACTGTCCCTGTGTTCTACAAGCTCGGTGGCCATGGCTTGGCTTTCACTATAGCAACTTCTAAAGAGCTCAAAGCCTTACCAAGTCAGTATCTTGGCCTCCTTAACTCCTCCGATGGTGGAAATTCCTCCAACCATTTATTCGCCGTCGAGTTCGACACTGTCCAGGACTTTGAATTCGGAGACCAGAACGACAACCATGTTGGAATCGACTTAAACAGCTTAGTCTCCAACGCATCTGAGACTGCAGCGTATTACACCGACGATTCAGGTTTAAAGAAGCAAGATCTCAATCTCTCCGGTGGGACGCCGATTATGGTTTGGGTGGATTACGATTCGGCTGCAAATCTAGTGAGTGTTACTCTGTCTCCTTCTTCTACAAAACCCAGAAAGCCACTCTTGTCTTTTCCCGTAGATCTCTCGCCGATTCTTAAAGATTATATGTATGTTGGATTCTCTGCTTCCACGGGTCTTCTCGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGTCCAGCTCGATCTCTCGATCTCTCTTCTCTCCCACATCTTCCAGGTCCGAAGAAGCAACCGACAAAGCTCATAATCGGCGTAACGGTGCCGGTGATACTGATTCCATTATCGGCGATAGCCGTCGGTATTTATTTGTTTAGAAAAATAAAAAACGCCGACATAATAGAAGCTTGGGAGCTAGAAATCGGACCCCATAGATATTCCTACGAAGAGCTCAAGAAAGCGACGAAAGGTTTCAAGGATAAGGAGCTTCTGGGACAAGGTGGGTTTGGTCGAGTTTACAAAGGAACACTCCCGAGTTCGAAAACCGAAGTCGCAGTCAAACGAATTTCCCACGAATCCAAACAGGGCCTTAGGGAGTTCGTCTCTGAAATCGCCAGCATTGGTCGGCTGCGTCACCGGAATCTCGTTCAACTTCTGGGTTGGTGTCGCCGGCGAGGCGACCTAATGCTCGTATACGATTACATGGCCAATGGGAGCTTAGACAAGTACCTATTCGACCAGCCAGAAACTATTCTATCCTGGGAACAAAGGTTCAAGATCATTAAAGGTGTCGCTTCTGGTCTCCTATATCTCCACGAAGGATACGAACAAGTCGTCATTCACAGAGACGTGAAAGCAAGCAACGTTTTACTTGACAACGAGCTCAATGGAAGATTAGGAGATTTCGGTCTGGCTAGATTATACGAACACGGAGCCAACCCAAGTACGACGAGAGTGGTGGGTACATTAGGCTATTTAGCTCCTGAATTACCTCGTACTGGTCGAGCCACGACAAGCTCCGATGTGTTTGCTTTTGGTGCTCTCATGCTCGAGGTGGTTTGTGGAAGAAGACCCATTGAACCGAAAGCTTTACCAGAAGAGTTGGTTCTCGTGGATTGGATTTGGGACAAGTACAGAGAAGGGAGGTTGCTGGAAGTGGTGGATCCAAAGTTGAATGGAGAATTTAAAGAAACAGAAGTAGTAATGGTGTTGAAACTGGGTTTGATTTGTTCGAATGATGTTCCTAATAACAGACCAACTATGAAGCAATTAATGATGTTTTTGGAAGGAGAAGTGGAATTGCCAGAGAGTTTGAGTCTGAGAAAACCATCTGGAGGGAATCAAATCCATGAAGGGTTCGATGAGTTCTTGTTCAATTCGCTTGCGTCGTCTTCGTTTGATGATAAGATGACTGCTAGTTCTTATACTGGACATTATAGAGAAACAGATGGTTCTACTCATTTTGCTTCTTTTAATACAACTTCACCTCATTCTCTTCTCCATGCCAGAGGAGAAACAAGGTGA 2079 0.456 MATLLLQLSSVFLFLLFPVSSQLDEVFFPGFKGVGNNITLNGLAEIEKNGILRLTNQTSRLMGHAFYSSPFQFKNSSSGKAFSFSASFALVTVPVFYKLGGHGLAFTIATSKELKALPSQYLGLLNSSDGGNSSNHLFAVEFDTVQDFEFGDQNDNHVGIDLNSLVSNASETAAYYTDDSGLKKQDLNLSGGTPIMVWVDYDSAANLVSVTLSPSSTKPRKPLLSFPVDLSPILKDYMYVGFSASTGLLASSHYILGWSFKINGPARSLDLSSLPHLPGPKKQPTKLIIGVTVPVILIPLSAIAVGIYLFRKIKNADIIEAWELEIGPHRYSYEELKKATKGFKDKELLGQGGFGRVYKGTLPSSKTEVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLMLVYDYMANGSLDKYLFDQPETILSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDNELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALMLEVVCGRRPIEPKALPEELVLVDWIWDKYREGRLLEVVDPKLNGEFKETEVVMVLKLGLICSNDVPNNRPTMKQLMMFLEGEVELPESLSLRKPSGGNQIHEGFDEFLFNSLASSSFDDKMTASSYTGHYRETDGSTHFASFNTTSPHSLLHARGETR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1103 692 FunFam L-type lectin-domain containing receptor kinase S.1 328 419 - -
Lele38g1103 692 FunFam L-type lectin-domain containing receptor kinase S.4 22 268 - -
Lele38g1103 692 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Lele38g1103 692 PANTHER - 20 620 - -
Lele38g1103 692 FunFam L-type lectin-domain containing receptor kinase S.4 420 626 - -
Lele38g1103 692 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1103 692 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Lele38g1103 692 SUPERFAMILY Protein kinase-like (PK-like) 325 620 IPR011009 -
Lele38g1103 692 CDD lectin_legume_LecRK_Arcelin_ConA 28 264 IPR001220 GO:0030246
Lele38g1103 692 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Lele38g1103 692 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Lele38g1103 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 281 IPR013320 -
Lele38g1103 692 ProSiteProfiles Protein kinase domain profile. 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1103 692 Gene3D - 26 263 - -
Lele38g1103 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Lele38g1103 692 CDD STKc_IRAK 349 609 - -
Lele38g1103 692 Pfam Legume lectin domain 28 274 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1103 Lele-ChrLele38 22248696 22250774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1103 19 621 Receptor kinase-like Gene Family AT3G55550 62.295 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele38g1103 PK_Tyr_Ser-Thr 9e-47 CL0016