Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1095 ATGTCTGTGAAGCTTGTGGCCATGGGGTTTGTGCTGGTGACAGCAACGGTCGTACACGTGAGGGGTGAAGATACAAGCTTCATCCTCAATAATGGCTTCCAATCGGCTCATTTAACTATGGATGCAAAATCGCTTCCCGGTGCTTTACCAAGTCAATACTTAAGTCTCTTCAATGACAACAACAATGGCAACAGTTCAAACCATGTTTTTGCCGTAGAGCTCGACGCCATACAGAGCAGAGAGTTCGGAGATATCAATGATAACCATGTCGGAATTGATATTAATAGCTTAAGGTCGGCTAATTCTACTCCTGCTGGATATTATGTTGAAGGGTCTCGCTTTCAAAATCTGAGTCTTATCAGTGGCCTCCCAATGCAGGTGTGGGTGGACTATGATGGAGTCAACAAGCAAATTAGTGTCACCCTAGCTCCCATCAACTTTAACAAACCCAAAACTCCATTGTTAACGTTATGCCAAGATCTTTCTCATGTTATAAACAATCCCAGTTATGTCGGATTCTCATACTCCACTGGGTCTGTGTTAACTTCTCATTATGTTCTTGGCTGGAGCTTCAAGCTCAACGGGGAGGCTCAAAACCTTGTCATTTCTCAACTCCCCAAGTTACTGCTACTTGGTGGGAAAACACAATCATTGATTTTGTTGATAAGGAAGATGAAGTTTTCTGAGATTCAAGAAGAGTGGGAGCAAGACTATGGCGCTCACAGATTCAAATACAAAGACCTCTACGTGGTCACGAAGGGATTCAAAGACAAAGACCTTCTGGGTAGTGGTGGATTTGGGAGAGTCTACCAAGGAACAATGCCAACTTCAAAATTTCATGTTGCTGTGAAGAAAGTTTCACATGAATCTCGACAAGGCATGGGGGAATTTGTTGCAGAAATCAGTCGACCAAGCACGCGTCAGATAGTGCGATATCTGAATAGGGAAGTTCCTTTGCCGGACATATCATCATCTTTAAGCTTATGTTCTACTTCTCCGGCGTTGTCATTTGGGAATCGCCAAGGATATTTTGACACTACAACGTCGTCCCTTCCATCTTATGTTGACAATTCTCTCTCTCAATGTTCAGTAGCTGAGTCATTTCTCTCTAGAGAATTAAAGATCAAACTTCAAAATAAACTTGTGATTCTATCTGAGCTATCTGCAACCATGTCTTTGATGGACAAGTTGATGGCGATGATGCTTTTGGCGGTGGTGATATCATCAACGGTTCAAGTGAGTGGTGGTGAAGATGCAAGCTTCATCTTCAATAATGGGTTCCAATCAGCTAATTTAACAATGGATGGTATTTCTGAGATCACCTCCAATGGCTTACTCCGACTCACCAACGAAACCAGGCAAGAAAAAAGCCATGCTTTCTATCCCAATCCAATACTTTTCAATGACTCTTCTTCTTTCTCTACCTCTTTTGTTTTCGCCATTAGATCTGAATACAAAACTCTGAGTGGCCATGGAATCGCTTTTCTAATTTCCCCAGCAAAAGCACTTCCAGGTGCTTTACCAAGTCACGAGTTTGATGATATCAATGATAACCATGTCGGAATCGACATCAATAGCTTGAAGTCAGCTCGTTCTGCTCCTGCAGGATATTATATAAACATGTCTCAGTTTCAGAATTTGAGTCTCATTAGTGGCCTTCCAATGCAGGTGTGGGTGGACTATGATGGAGGAAGGAAGCAAATTAGTGTAACCCTAGCTCCAATCGATGTTAACAAACCCAAAACTCCATTGTTAACGTTGTCCCAAGATCTTTCTCATGTTATAAACAATCTCAGTTATGTCGGATTCTCATCCTCCACTGGTTCTGTGTTAACTTCTCATTATGTTCTTGGTTGGAGCTTCAAGCTCAATGGGATGGCTCAAAACATAGTTATCTCTAAACTCCCAAAGCTACCAAGAGTTGGTGGAAGAAAGCAGTCTATATTTTTGCCAATTGGGTTACCTTTGATTTCACTTTGTTTAATTCTTCTTGTGACTGTATCTAGTTTTTATTACATAAATAGAAAAAAGAAATTTTCAGAGATTCTTGAAGAGTGGGAGCAAGATTATAGTGCTCAAAGATTAGGAGATTTCGGTCTTGCAAGATTATATTACCATGGCAGTGATCCTCAAACGACACATGTGGTCGGAACATTGGGTTATCTAGCACCGGAGCAGACAAGAACAGGGAAAGGAACGACGAGGTCAGATGTTTTTGCTTTTGGCGCATTTTTGCTTGAGGTTGCGTGTGGGAGAAGGCCCATAGAGCAAGTAAATGAAGAAGAGAGTGTGATATTAGTAGATTGGGCTTATGAATTATGGAATAGGGGTGAGATTATTATGGCAAAGGATCAAAATTTGGGAATAGAATATTGTATAGAAGAGGTGGAGTTAGTGTTGAAACTAGGGCTTTTGTGTTCAAATTCACATCCGTTAAGTAGGCCAAGTATGCGTCAAGTTGTGCAGTATCTGAATTGGGAGGTACCTTTGCCTGATTTGTCATCACTAAGCTTATGTTCTTCTTCTCCAAGCTTATCATTTGGGCATCATCAAGAGTTTCTTGAGTCTACTGTGCCTTTTCCATCTTTTGTTGATCAGTCTTTCTCTCACAGTCCTTCAGTAGCTGAGTCGCTTCTCTCTGGAGGTCATTGA 2652 0.414 MSVKLVAMGFVLVTATVVHVRGEDTSFILNNGFQSAHLTMDAKSLPGALPSQYLSLFNDNNNGNSSNHVFAVELDAIQSREFGDINDNHVGIDINSLRSANSTPAGYYVEGSRFQNLSLISGLPMQVWVDYDGVNKQISVTLAPINFNKPKTPLLTLCQDLSHVINNPSYVGFSYSTGSVLTSHYVLGWSFKLNGEAQNLVISQLPKLLLLGGKTQSLILLIRKMKFSEIQEEWEQDYGAHRFKYKDLYVVTKGFKDKDLLGSGGFGRVYQGTMPTSKFHVAVKKVSHESRQGMGEFVAEISRPSTRQIVRYLNREVPLPDISSSLSLCSTSPALSFGNRQGYFDTTTSSLPSYVDNSLSQCSVAESFLSRELKIKLQNKLVILSELSATMSLMDKLMAMMLLAVVISSTVQVSGGEDASFIFNNGFQSANLTMDGISEITSNGLLRLTNETRQEKSHAFYPNPILFNDSSSFSTSFVFAIRSEYKTLSGHGIAFLISPAKALPGALPSHEFDDINDNHVGIDINSLKSARSAPAGYYINMSQFQNLSLISGLPMQVWVDYDGGRKQISVTLAPIDVNKPKTPLLTLSQDLSHVINNLSYVGFSSSTGSVLTSHYVLGWSFKLNGMAQNIVISKLPKLPRVGGRKQSIFLPIGLPLISLCLILLVTVSSFYYINRKKKFSEILEEWEQDYSAQRLGDFGLARLYYHGSDPQTTHVVGTLGYLAPEQTRTGKGTTRSDVFAFGAFLLEVACGRRPIEQVNEEESVILVDWAYELWNRGEIIMAKDQNLGIEYCIEEVELVLKLGLLCSNSHPLSRPSMRQVVQYLNWEVPLPDLSSLSLCSSSPSLSFGHHQEFLESTVPFPSFVDQSFSHSPSVAESLLSGGH 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1095 883 CDD lectin_legume_LecRK_Arcelin_ConA 420 625 IPR001220 GO:0030246
Lele38g1095 883 SUPERFAMILY Protein kinase-like (PK-like) 694 834 IPR011009 -
Lele38g1095 883 SUPERFAMILY Concanavalin A-like lectins/glucanases 67 277 IPR013320 -
Lele38g1095 883 Gene3D - 417 624 - -
Lele38g1095 883 FunFam Lectin-domain containing receptor kinase A4.3 657 841 - -
Lele38g1095 883 SUPERFAMILY Concanavalin A-like lectins/glucanases 420 641 IPR013320 -
Lele38g1095 883 Pfam Protein kinase domain 693 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1095 883 Gene3D Phosphorylase Kinase; domain 1 240 315 - -
Lele38g1095 883 ProSiteProfiles Protein kinase domain profile. 255 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1095 883 SMART serkin_6 255 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1095 883 CDD lectin_legume_LecRK_Arcelin_ConA 43 195 IPR001220 GO:0030246
Lele38g1095 883 Gene3D - 27 201 - -
Lele38g1095 883 Pfam Legume lectin domain 419 508 IPR001220 GO:0030246
Lele38g1095 883 Pfam Legume lectin domain 43 205 IPR001220 GO:0030246
Lele38g1095 883 Pfam Legume lectin domain 510 636 IPR001220 GO:0030246
Lele38g1095 883 PANTHER - 411 675 - -
Lele38g1095 883 ProSitePatterns Protein kinases ATP-binding region signature. 261 285 IPR017441 GO:0005524
Lele38g1095 883 Gene3D Transferase(Phosphotransferase) domain 1 672 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1095 Lele-ChrLele38 22209331 22218468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1095 673 882 Receptor kinase-like Gene Family AT3G53810 55.189 5.55e-60 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele38g1095 Lectin_legB 9.1e-48 CL0004