Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1083 ATGGTTGACTTCTCAACCATTTCAGAGTCAGTAATGATGGAGGAAGCAGTAATGGCAGCTTATTCTTCAGATGGGTCAGAAGAAGATAACCTCTTCAGAGAGTTTTTAGATTATAACAATCATTATGAACCGTCTCCTTTCTTCTCCTGCATTGAAGAACCCATCAACATAAAAAAATCATCAGGTTCCACCATTAACTCATTGATCTCCAACATTTATTCAGGACCTACCATTTCTGATATTGACAACGACTTGTCGTTCACCAACCACAAACAACATTCCCACCAAGACGTCTCCATTTCCAGGGTTTCGATACTGGAGAGAGGACTGAGCAATATAGAGAATAAGTATACACTGAAAATGAAGTGCTTTGGGAATGGCATGGGTGATGATGGATATAAGTGGAGGAAGTACGGTCAGAAATCTATTAAGAATAGTCCAAATCCTAGGAGCTACTATAGGTGCACTAATCCAAGGTGTAATGCCAAGAAGCAAGTGGAAAGATGCAACGAGGACCCAGACACTCTTATTATCACTTATGAAGGGCTTCACCTTCACTTTGCTTATCCATATCTGTTGATGACTGAGGCCCATGAATCCCTCCCACCACCAACAAAAGGCCCAAGATCAACACGGCCTTTTATCAGGACCAGGCCCATCAAGTCCCACACGAACTGGAATCTGATCAGGCCCGGGTCCATGACATTAGTGTGGGATCGCAAGGGTTGCTTGAAGACATGGTGCCTTTGA 750 0.432 MVDFSTISESVMMEEAVMAAYSSDGSEEDNLFREFLDYNNHYEPSPFFSCIEEPINIKKSSGSTINSLISNIYSGPTISDIDNDLSFTNHKQHSHQDVSISRVSILERGLSNIENKYTLKMKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERCNEDPDTLIITYEGLHLHFAYPYLLMTEAHESLPPPTKGPRSTRPFIRTRPIKSHTNWNLIRPGSMTLVWDRKGCLKTWCL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1083 249 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele38g1083 249 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele38g1083 249 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele38g1083 249 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 190 IPR044810 GO:0003700
Lele38g1083 249 SUPERFAMILY WRKY DNA-binding domain 127 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele38g1083 249 Gene3D WRKY domain 125 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1083 Lele-ChrLele38 22119327 22121479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1083 68 193 WRKY Transcription Factor Family AT5G43290 58.730 3.04e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele38g1083 WRKY 8.2e-26 CL0274