Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1069 ATGGCTGAGGTGGAATCGGAGGAGTGTTGCCAGGAGAATAAGCAAACTATTGCTGCTTCTAGCTCCTCTATATCTGAAAGCAGTGGCAGCGCTCTACCCAAGTCTCCTGGAATATGTAGCCCAACGTCTACATCACCCTCTCATCGGAGAACTACTGGCCCTATAAGGCGTGCGAAGGGTGGTTGGACAGCAGAAGAGGATGAGACACTGAGGAATGCTGTTGCAATTTTAAAGGGAAAGAATTGGAAGAAAATAGCTGAGTTTTTCCCTGATAGATCAGAAGTGCAATGTCTTCACAGATGGCAAAAAGTTCTTAACCCAGAACTTGTTAAAGGTCCTTGGACTCAGGAGGAGGATGATAAAATTGCTGAACTAGTGTCAACATATGGGCCTACAAAATGGTCGGTAATAGCCAAGTCCCTGCCTGGTCGTATAGGGAAACAATGCCGAGAGCGATGGCACAACCATCTTAATCCGGACATAAAAAAGGATGCCTGGACTTTGGCAGAGGAATTAGCCCTCATGAATGCTCATTGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAAAAGTTGGACTTTTATTTAACTACTGGACAACTTTCACCAATTTCAAAGAATAGTCCAAAAGTTGATGTCAAAGACAAAATGATATGCTCTGCAACAGAAACAATTCTTGTTAGTCCAAGTAAAGTATTAGATGCAGCTACTGAAACATTGTCAGAAACTACAGAGATTAATAAGCAAGATGACGGTGGTAAGAATCACTCAAGGCAGTTCGCAACAGCAAGAGATGTTGGTGATTCTTCAAATGTTCTTGCAAAAGAATCTGCTGATTCTGACTGTATAGAGTGCAAGCCCAAATCCTCCAATTTAGAGTTGAGCTGCAGCAACTCAGAACCAATGTCAAGAGACAATTTTGGAATAGATGGTGAACAAACACATGAGAAATCTGGACTCAATCGCAAGCTAGCAACCGAGCATTGTATAAGTAATGGTGAAATGAGTAGAAGCAGGTTGATCACAAAACCTTTTCCACAGGAAGGTCCAACTTGTGGTTCTTTATGTTATAAGCCACTGCAGATGGAGAATTTGGTTCCTTTAGATTCTCTTTATTTAAATATCTTTTATCTCCAAAATGACTACAGCCCTACCCCCATGGTGTCTCCTGCTGGTTTCTTCACTCCACCTTGTGTGAAGGGTCGTGAATTTTTCAAACAAACTCCTGAATCAATATTGAAAATGGCTGCTGAGACTTACCCAAATACCCCTGCCATATTGAGGAAGAGAAGGGCTGGAGTCCAGACACAGGTCACTCCCAGTAAAGTAGTGAAAGTTGATGGAGAATCTCATGCTTCTATTGGTCAGCAGAGAAATAAGAATTATATTGATTCTGAGGTTGGGAGGTTCTCTGAGAGTCCAGCAAGCCATGGCCATGGCAATGACCTTCCCAATAATAAGATTTTCAATGCATCTCCACCCTACCGTTTAAGATCCAAACGGACAACAGTTGTCAAGTCTGTGGAGAAACAACTTGATCTTGCATTTGACCAAGAAAAGCACAACGGCATCAAGAGGAAAATGGATAAGTCTTCAACGTAG 1662 0.4212 MAEVESEECCQENKQTIAASSSSISESSGSALPKSPGICSPTSTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVAILKGKNWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIAELVSTYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLAEELALMNAHCIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLTTGQLSPISKNSPKVDVKDKMICSATETILVSPSKVLDAATETLSETTEINKQDDGGKNHSRQFATARDVGDSSNVLAKESADSDCIECKPKSSNLELSCSNSEPMSRDNFGIDGEQTHEKSGLNRKLATEHCISNGEMSRSRLITKPFPQEGPTCGSLCYKPLQMENLVPLDSLYLNIFYLQNDYSPTPMVSPAGFFTPPCVKGREFFKQTPESILKMAAETYPNTPAILRKRRAGVQTQVTPSKVVKVDGESHASIGQQRNKNYIDSEVGRFSESPASHGHGNDLPNNKIFNASPPYRLRSKRTTVVKSVEKQLDLAFDQEKHNGIKRKMDKSST 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1069 553 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Lele38g1069 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Lele38g1069 553 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Lele38g1069 553 Gene3D - 58 110 - -
Lele38g1069 553 FunFam Transcription factor MYB3R-2 164 231 - -
Lele38g1069 553 CDD SANT 113 157 IPR001005 -
Lele38g1069 553 MobiDBLite consensus disorder prediction 11 51 - -
Lele38g1069 553 FunFam Transcriptional activator Myb isoform A 111 163 - -
Lele38g1069 553 MobiDBLite consensus disorder prediction 489 513 - -
Lele38g1069 553 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Lele38g1069 553 Gene3D - 164 237 - -
Lele38g1069 553 SMART sant 162 210 IPR001005 -
Lele38g1069 553 SMART sant 110 159 IPR001005 -
Lele38g1069 553 SMART sant 58 107 IPR001005 -
Lele38g1069 553 CDD SANT 165 208 IPR001005 -
Lele38g1069 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Lele38g1069 553 MobiDBLite consensus disorder prediction 262 289 - -
Lele38g1069 553 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Lele38g1069 553 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Lele38g1069 553 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Lele38g1069 553 PANTHER MYB PROTEIN-RELATED 59 130 - -
Lele38g1069 553 MobiDBLite consensus disorder prediction 264 278 - -
Lele38g1069 553 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Lele38g1069 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Lele38g1069 553 MobiDBLite consensus disorder prediction 1 56 - -
Lele38g1069 553 FunFam Transcriptional activator Myb isoform A 58 110 - -
Lele38g1069 553 Gene3D - 111 162 - -
Lele38g1069 553 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Lele38g1069 553 CDD SANT 62 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1069 Lele-ChrLele38 22002638 22006270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1069 49 541 MYB Transcription Factor Family AT5G02320 48.728 3.10e-130 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele38g1069 Myb_DNA-binding 1.6e-14 CL0123