Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1064 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCCCAGAACAACTGATGATTTTGGAGGAACTATATAAGAGTGGGATTAGAACTCCTAGTGCTTCCCAAATCCAACACATAACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGGGATAGACAGAAGCTCAGGAGGAAACTAAACAAGCAGCTCCAACTTCAACAACAACATCAGATGCTAACAGCCCATCAATGCCAAGTGATTAATCAGGATAAGACTCATCACTGGTTTTTTGGTGGCTTTGATTCTTCTCCCGGTTCTGGTTCTTCTTCTGCCCAACAAGTTTCTTTTTATAACCCAGCTTTCTTGCTTTCTCTGGGAGAAACAGGAGAGACAAGATCAGAGACATGGAATAAGACTGCGCAGAAGCAAGAAAGTGAGGTGAATAAAACAAAGACGTCGTCATCATCACTTTACAACTATGGTATGAATTGTTGGAGATTTGCGGATGTTAATGAAGAAGCATCCTCATCATATTGCAGTACAAGACGGCCTCCTCTCAAGACTCTTGACCTCTTTCCAACTACTTCCACCAAACTCAAAGAAGACCCCTTTACCCCAAAACTCTGA 645 0.4202 MSRAGSSRWSPTPEQLMILEELYKSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQHQMLTAHQCQVINQDKTHHWFFGGFDSSPGSGSSSAQQVSFYNPAFLLSLGETGETRSETWNKTAQKQESEVNKTKTSSSSLYNYGMNCWRFADVNEEASSSYCSTRRPPLKTLDLFPTTSTKLKEDPFTPKL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1064 214 SMART HOX_1 4 71 IPR001356 GO:0003677
Lele38g1064 214 CDD homeodomain 8 67 IPR001356 GO:0003677
Lele38g1064 214 FunFam WUSCHEL-related homeobox 11 6 73 - -
Lele38g1064 214 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Lele38g1064 214 Gene3D - 1 67 - -
Lele38g1064 214 SUPERFAMILY Homeodomain-like 4 69 IPR009057 -
Lele38g1064 214 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Lele38g1064 214 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 206 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1064 Lele-ChrLele38 21970329 21971565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1064 6 72 Wox Gene Family AT3G18010 71.642 9.79e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele38g1064 Homeodomain 5.8e-18 CL0123