Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1049 ATGAATGGTGGGGTGAAACCGCAAGTGAAAGTGGGAGATTTCTTTGAAGAAGAAGAAGGAACGGTTATAGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCAGAGTAATAATGGCGGCCATGGCCACCAAGATGATGAAGATGATCTTCTTGCTGGTGTAATGGACGATGCTTCTCTGTTCTATGCAGACGATGATTTCCCTTCTCTTCCAGATTTCTCATGCATGTCGTCTTCTTCATCTTCATCTTCACCACCAGCAGCCACAACAGTTGAAACCGTCGTCACGTGCGCCGCCACCTCCTCCTCCAATACGTCGTCTTCTGATTGCGTGGCTTCATTGGCGAATCTCAAGTCAAATGCATCAGAGCCTCATCATCTCTCACCACCGCCACAGACACAGCCGCCGCCGGCGTTATCCTCCACTGCTTCTATGGAGATCTTGCAGCCGCCAGATCATCAAGGCTGCAGAGATTGTCTGGACATGATGGACACATTTGGGACTATGGAACTCATGGAAAGCAACGAATTATTCGATCCGTCATCAATCTTTGCAAACGAAGAGAATCTATTAGACGAATTGGCAGATTTAGACCCGAATCCGCCGGAAGAGGGACATGCAAGTGGTGGAATGATACTACAGGAGGAACAGCAGCAACAACAACAACCACCGCCGTTGGCGGAGATGGCGACGGATGAAGAGATGAGTTCGGTGTTCTTGGAGTGGCTGAAAATGAACAAGGATAGCGTGTCGGCAAGTGATTTGAGGAACGTGAGGTTGAAGAAGGCGACAATAGAATGTGCAGCGAAGCGTCTTGGTGGAGGAAAAGAAGGCATGAAGCAATTACTGAAACTGATTTTGGAATGGGTTCAGACCAGTCATCTTCAGAAGAAAAGGAGCATGGATCAAAATCATGATAATGATGACAATCTTTTCATGACTCAGTTTCAGGAGAATACCACAAACCCTAGCTCTAATCTCAACCCTCAATCTTCATTCGGACAGGAATGGGTCTCTCAGCCGCCTTATGGGGTTGATCCGGCGGCTCTAACGGCTGCTCAGCCATTTCCGCAACCGGTCCTGGGAGGCCCGTTTTCAAATGGGGCTTCAACTGAATTTCATGCACTGGATTCTACTCACTCTTGGCCTCATTCTCAGTTCCCTGTTTACCACAACCACCCATTCGGGGACAATAATCTACACCCAACGACGGCGATGGCGGCGTTCGGCGGTTATGGGAACAATCAGTACCAGTATCAGTATTTTCATGGCGTTGGCGCAGATAGATTGGGTCCGTTGGCAACCAAAGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGACGGCATGTAACTCATCACAGGCATCAAAATGCGCAAGACCAACAAAACCCGCAGAATCAAACTAGTGATTGTTGCACTGCTGCTACAGTATCCCCTCATGCAAATCCACCCAACTGGTTGTATTGGCCGCCGCCGGTGGCTGTGTCCAATGATGGAGCCGCTTCTGTAACGCCAACGGCTCAGTTGGAGCCACCGTCAGGGAGAAATGCGGGGGATCGGACCACCATGCAGTCCGACCAGAATCATCAACAAAGCCAGCTCTCATCAGAGAAACGACAGCAGGGATGGAAGCCTGAGAAGAACTTGAAGTTCCTTCTGCAGAAGGTGTTAAAGCAAAGCGACGTGGGTAATCTGGGGAGAATAGTGTTGCCAAAGAAAGAAGCAGAAACACATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCGATAGCAATGGAAGACATTGGAACTTGTCGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATTTGCTCGAGAATACTGGAGATTTTGTGAGAGCCAACGGACTTCAAGAAGGAGACTTCATAGTGATATATTCAGATGTCAAATGTGGCAAATATATGATAAGGGGTGTGAAGGTAAGGCAAGCAGGTGCGAGGCTTGAGGGGAAGAAAGCAGGAAAATACCAGAAGGCTAATGGATCTGATAATCCATCTTCTTCTTCACCAAACAAGAATGAGAAAAAGCAATAA 2070 0.4816 MNGGVKPQVKVGDFFEEEEGTVIAAVKEREIWLQSNNGGHGHQDDEDDLLAGVMDDASLFYADDDFPSLPDFSCMSSSSSSSSPPAATTVETVVTCAATSSSNTSSSDCVASLANLKSNASEPHHLSPPPQTQPPPALSSTASMEILQPPDHQGCRDCLDMMDTFGTMELMESNELFDPSSIFANEENLLDELADLDPNPPEEGHASGGMILQEEQQQQQQPPPLAEMATDEEMSSVFLEWLKMNKDSVSASDLRNVRLKKATIECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRSMDQNHDNDDNLFMTQFQENTTNPSSNLNPQSSFGQEWVSQPPYGVDPAALTAAQPFPQPVLGGPFSNGASTEFHALDSTHSWPHSQFPVYHNHPFGDNNLHPTTAMAAFGGYGNNQYQYQYFHGVGADRLGPLATKEARKKRMARQRRHVTHHRHQNAQDQQNPQNQTSDCCTAATVSPHANPPNWLYWPPPVAVSNDGAASVTPTAQLEPPSGRNAGDRTTMQSDQNHQQSQLSSEKRQQGWKPEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQAGARLEGKKAGKYQKANGSDNPSSSSPNKNEKKQ 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1049 689 SMART B3_2 552 654 IPR003340 GO:0003677
Lele38g1049 689 MobiDBLite consensus disorder prediction 436 476 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 456 476 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 439 453 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 317 337 - -
Lele38g1049 689 Pfam B3 DNA binding domain 553 649 IPR003340 GO:0003677
Lele38g1049 689 MobiDBLite consensus disorder prediction 497 542 - -
Lele38g1049 689 SUPERFAMILY DNA-binding pseudobarrel domain 551 646 IPR015300 -
Lele38g1049 689 ProSiteProfiles B3 DNA-binding domain profile. 552 654 IPR003340 GO:0003677
Lele38g1049 689 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 230 661 IPR044800 GO:0003700
Lele38g1049 689 Gene3D - 543 657 IPR015300 -
Lele38g1049 689 FunFam B3 domain-containing transcription factor FUS3 548 662 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 498 538 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 120 140 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 317 338 - -
Lele38g1049 689 CDD BfiI_C_EcoRII_N_B3 550 651 - -
Lele38g1049 689 MobiDBLite consensus disorder prediction 660 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1049 Lele-ChrLele38 21865372 21867771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1049 29 680 B3 DNA Binding Superfamily AT3G24650 46.355 1.93e-153 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele38g1049 B3 2.3e-17 CL0405