Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1047 ATGGATCAATGCAGTCGGGAGTTGAGATGTTTGAACATGACACATGTAGGTTTGGTATTACATGTTTCTCGTGTTTGTTTAAGAAAATTTATTAGCAATATTGCAGAGCTCAACCAAGTTGCTTATTGGCATTTTACTACTAATTCTATTATTCTTGGCGTGATTCCATCCCCATCAGTATCATCAACCTATGGGCATTTCATTCATTTAATTTTGATTTCGACTCAGAAAGAAGACATTGAATCTCTGCACTTCCCTCTTGATATTGACAGTCTGATGTGTCATGCTCAGAGGTTAATAAGTTGTGTCCGGACTCTAGGGAGCGGTATTACGAGGAGATTTTTTCCTAATCCCTACTCGCATTCTTCATCTGCAGATTTCACCACAATGTCCAGCACTGTTGGTCTCACGATTCCATGCAAAGCTGCAGTAGCATGGGAAGCAGGGAAACCATTGGTGATGGAACGAGTGGAGGTAGCTCCACCACAGGCCATGGAAGTGAGGATCAAGGTCAAATATACGTCTCTCTGCCACACTGATCTCTACTTCTGGGAGGCCAAGGGGCAAACTCCTCTTTTCCCCAGAATTTTTGGGCACGAGGCAGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTGACAGAGTTGCAAGCAGGGGATCACGTGCTTCCGGTATTCACTGGGGAATGTGGAGAATGTGCACATTGCAAGTCTGAGGAGAGCAACATGTGTGACCTTCTGAGAATAGATACAAACAGAGGAGTGATGCTCAGTGATGAAAAAAGCAGGTTCTCCATTAATGGCAACCCTATCAACCACTTTCTTGGCACTTCCACTTTCAGCGAATACACTGTCGCTCACTCCGGCTGCCTTGCAAAGATCAATCCTCTCGCACCTATGGATAAAGTCTCTGTGCTCAGCTGCGGCATTTCAACAGGATTGGGAGCTACCCTGAATGTGGCAAAACCAAAGAAAGGTTCCTCTGTTGCAGTCTTTGGTCTTGGAACTGTCGGCCTGGCTGCTGCAGAGGGGGCTAGAATTGCTGGGGCATCTAGGATCATTGGGATTGACTTGAACCCTAGTAGATTTGAAGCAGCCAAGAAATTTGGAGTGACTGAGTTTATAAATCCAAAGGATTATGATAAACCAGTTCAAGAGGTTATTGCAGAGATGACAAACGGTGGAGTGGACCGTAGTGTGGAGTGCACTGGAAATATCAACGCCATGATCTCTGCTTTTGAATGTGTTCATGATGGTTGGGGAGTTGCAGTGCTTGTAGGAGTACCCAACAAGGATGCAGTGTTCATGACGAAACCAATCAATGTGCTAAACGAAAGAACACTAAAAGGGACTTTCTTTGGGAACTACAAGCCCAGAACAGACCTTCCATCGATTGTTGACATGTACATGAACAAGAAGTTGGAATTGGAAAAGTTTATAACACACAGAGTTCCATTCTCTGAGATTAACAAGGCGTTCGAGTTCATGATAAGGGGAGAGGGACTACGCTGTATCATTGACATTGACGAATAG 1530 0.4471 MDQCSRELRCLNMTHVGLVLHVSRVCLRKFISNIAELNQVAYWHFTTNSIILGVIPSPSVSSTYGHFIHLILISTQKEDIESLHFPLDIDSLMCHAQRLISCVRTLGSGITRRFFPNPYSHSSSADFTTMSSTVGLTIPCKAAVAWEAGKPLVMERVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVTELQAGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTNRGVMLSDEKSRFSINGNPINHFLGTSTFSEYTVAHSGCLAKINPLAPMDKVSVLSCGISTGLGATLNVAKPKKGSSVAVFGLGTVGLAAAEGARIAGASRIIGIDLNPSRFEAAKKFGVTEFINPKDYDKPVQEVIAEMTNGGVDRSVECTGNINAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSIVDMYMNKKLELEKFITHRVPFSEINKAFEFMIRGEGLRCIIDIDE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1047 509 Pfam Zinc-binding dehydrogenase 336 460 IPR013149 -
Lele38g1047 509 Pfam Alcohol dehydrogenase GroES-like domain 166 291 IPR013154 -
Lele38g1047 509 CDD alcohol_DH_plants 138 506 - -
Lele38g1047 509 FunFam alcohol dehydrogenase 1-like isoform X1 148 311 - -
Lele38g1047 509 Gene3D - 149 499 - -
Lele38g1047 509 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 298 472 IPR036291 -
Lele38g1047 509 SUPERFAMILY GroES-like 457 505 IPR011032 -
Lele38g1047 509 Gene3D - 312 450 - -
Lele38g1047 509 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 198 212 IPR002328 GO:0008270|GO:0016491
Lele38g1047 509 FunFam Alcohol dehydrogenase class-P 312 450 - -
Lele38g1047 509 SUPERFAMILY GroES-like 133 315 IPR011032 -
Lele38g1047 509 PANTHER ALCOHOL DEHYDROGENASE 137 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1047 Lele-ChrLele38 21855092 21859834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1047 166 507 Monolignol Biosynthesis Gene Families AT1G72680 23.563 1.09e-11 64.3