Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1045 ATGGCGGGGACGAAGCTTTTATCTCTCTACATTTTCATGTTTACCTTCTTATTCTGCAGCTACTACACCAGCGAATCCAATGCCTCTGCAACGCCGCCTTCTTCTTCTTCGGATGTTGCGCTTCTATTGGGTAAAATCAGAGCTACTCTTCAAGGTAACGCCGATAACCTCGTTTTGTCTTCATGGAATTTCTCTATACCGCTTTGCCAATGGAGGGGACTAAAATGGGTTTTCTCAAATGGCTCTCCTCTGTCATGCAATGACTTCTCTTCACCACAATGGACCAATCTTTCGCTTTTCAGAGACCCCTCTTTACATTTACTCTCTGTTCAACTTCCTTCTGCGAATCTCTCTGGTTCGCTTCCTAGGGAGCTTGCAGAGTTTCCAATGCTTCAGAGTCTCTACTTCAACATCAATTCGTTGAAAGGGACAGTTCCTATTGAGCTTGGATATGGTTCCTCACTTAACGATGTCGTTTTGGATGACAATATGTTGAGTGGAGCTTTACCACCATCGATCTGGAATTTGTGTGATAAACTCGTTTCTCTTAGACTCCATGGCAACATGTTTTCCGGGTCTCTTCCTGAACCGGCATTGCCCGAATCTTCTTGCAAGAATCTGCAATTTCTTGATTTAGGTGACAACAACTTTTCTGGGGTTTTCCCTGAATTCATCACACGTTTTGGTGGGCTGAAACAACTTGACTTGGGAAATAATATGTTTACGGGTTCAATTCCTCAGAGCTTAGCTGGGCTAAATAAGTTAGAGAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTACCTACTTTTGGTGAATCGTCCAAATTTGGTGTGGAGGGTTTTGAAGGGAATAATCCAGGCTTGTGTGGGGTACCTTTAAGAGCTTGTAATGGAACTCCTAGATTGAGCTCTGGTGCAGTTGCTGGTATAGTTATCACTCTCATGACTGGAGCTGTGGTTTTAGTTTCTTTGCTTATAGGGTATATGCAAAATAAGAGAAGGAAGGGTAAGGGAGATAGCGAAGACGAATTGGAGGAAGATGAAGATGATTATGATGAAGAAAATGGTGGTGGCAACAATGGTGCTATAGGTGGTGGTGAAGGGAAGCTTATGTTGTTCCAAGGCGGTGAGAATTTGTCTTTAGACGATGTGTTGAATGCGACAGGGCAAGTTATGGAGAAGACATGTTATGGGACTGTTTATAAGGCAAAGCTTGCTGATGGAGGAACCATTGCTTTGAGGTTATTGAGAGAAAGTAGCTGCAAGGATAGGGCTTCATGCTTACCGGTTATTAAGCAATTGGGAAGGATCCGACATGAGAATTTGATTCCTTTGAGAGCCTTCTACCAGGGGAAGAAAGGAGAGAAGCTTCTTATTTATGAATATCTTCCTCTCAGAACTCTTCATGATCTTTTACATGACCCTAAAGCTGGAAAATGTGTGCTAAACTGGGCCAGGCGACACAAGATTGCATTGGGAATAGCCAGGGGACTAGCATATCTTCATACAGGACTCGATGTTCCAATCACTCATGGCAATGTACGATCCAAGAACGTGCTAGTTGACGAGTTCTTTGTTGCCAGGCTCACTGAGTTCGGGCTGGACAAGCTAATGATTCCTGCTGTAGCTGATGAAATGGTGGCGCTTGCAAAAACGGATGGCCACAAGGCTCCGGAGCTTCAAAAGATGAAGAAATGCAACTCGAGGACCGATGTTTATGCATTCGGGATATTACTGTTGGAGATATTGATAGGGAAGAAGCCGGGTAAGAATGGGAGGACCGTGGAGGTGGTGGATCTTCCCTCTATGGTGAAAGTGGCGGTGTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAGCTACTGAAAGGGATAAGGAGTCCAATGGAAGATGGGTTGGTGCAAGCGTTGAAGCTAGCAATGGGATGTTGTGCACCAGTGGCTTCAGTGAGACCAAGCATGGAGGAAGTTGTGAGGCAGTTGGAGGAGAATAGGCCCAGGAATAGGTCTGCTTTATATAGCCCTACAGAAACAAGAAGTGGCAGCGTCACTCCTTTTTGA 2067 0.4451 MAGTKLLSLYIFMFTFLFCSYYTSESNASATPPSSSSDVALLLGKIRATLQGNADNLVLSSWNFSIPLCQWRGLKWVFSNGSPLSCNDFSSPQWTNLSLFRDPSLHLLSVQLPSANLSGSLPRELAEFPMLQSLYFNINSLKGTVPIELGYGSSLNDVVLDDNMLSGALPPSIWNLCDKLVSLRLHGNMFSGSLPEPALPESSCKNLQFLDLGDNNFSGVFPEFITRFGGLKQLDLGNNMFTGSIPQSLAGLNKLEKLNLSHNNFSGVLPTFGESSKFGVEGFEGNNPGLCGVPLRACNGTPRLSSGAVAGIVITLMTGAVVLVSLLIGYMQNKRRKGKGDSEDELEEDEDDYDEENGGGNNGAIGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLRESSCKDRASCLPVIKQLGRIRHENLIPLRAFYQGKKGEKLLIYEYLPLRTLHDLLHDPKAGKCVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEMVALAKTDGHKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRTVEVVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1045 688 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Lele38g1045 688 SUPERFAMILY Protein kinase-like (PK-like) 397 664 IPR011009 -
Lele38g1045 688 MobiDBLite consensus disorder prediction 669 688 - -
Lele38g1045 688 MobiDBLite consensus disorder prediction 663 688 - -
Lele38g1045 688 Gene3D Phosphorylase Kinase; domain 1 372 464 - -
Lele38g1045 688 Gene3D Transferase(Phosphotransferase) domain 1 466 680 - -
Lele38g1045 688 SUPERFAMILY L domain-like 79 296 - -
Lele38g1045 688 Gene3D Ribonuclease Inhibitor 201 301 IPR032675 -
Lele38g1045 688 MobiDBLite consensus disorder prediction 336 362 - -
Lele38g1045 688 Gene3D Ribonuclease Inhibitor 40 200 IPR032675 -
Lele38g1045 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 196 - -
Lele38g1045 688 Pfam Protein tyrosine and serine/threonine kinase 392 663 IPR001245 GO:0004672|GO:0006468
Lele38g1045 688 ProSiteProfiles Protein kinase domain profile. 388 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1045 688 FunFam Leucine-rich repeat receptor-like protein kinase 204 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1045 Lele-ChrLele38 21836396 21839192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1045 1 688 Receptor kinase-like Gene Family AT3G24660 71.553 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele38g1045 PK_Tyr_Ser-Thr 2.6e-25 CL0016