Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1032 ATGAGTTGCTTCGCATGTTTTTCTTCACACACAGAAAAAAGATTGTCAAAGAAAAATGGAAAGAATACAGACTTGTCTCCATCTACAACTTCTGTTTCATTAGAAGCCTCTACACAGCCACGCCATGAAACTCAAAACCCTAATCCAAAGCCCACTTCACAGCCGACAACAGAAGCTGAAACAAATAAGGATGCCATCAAAGACATTGACGGCAATAACAATATTGCTTCACAGAACTTCACCTTCCGAGATCTAGCGGTGGCAACAAAGAACTTCAGGAAAGAAACCCTAATTGGTGAAGGTGGATTCGGAAGGGTTTATAAAGGGCGAATAGAAAAAATCAACCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTAATGTTGAGCCTCTTACATCATGAAAATCTAGTGAATCTAGTTGGTTATTGTGCTGATGGAGATCAGAGACTTTTGGTATACGAGTACATGCCATCTGGATCTGTAGAGGATCGTCTTCTTGATGTGTCTCTTAATCAAAAGCCACTAGATTGGAATACAAGGATGAAAATAGCCTTGGGAGCTGCAAAAGGGTTAGAATATTTACATGACAAGGCGAATCCACCAGTGATCTATAGGGACTTGAAAGCGGCCAACATCTTGCTAGACAAGGATTTCAATGCAAAACTTTCAGACTTTGGACTAGCCAAGCTTGGACCTATGGGAGACAAGTCCCATGTTTCTACTAGAGTCATGGGAACTTATGGATATTGTGCTCCTGAATATCAACGAACAGGTCAACTCACTGTAAAATCAGACGTCTATAGTTTTGGAGTTGTCTTACTCGAATTGATCACCGGAAAAAGAGTCATTGACACCACAAGATCCACACGTGAACAAAACCTTGTCAATTGGGCACAACCAATGTTCAAGGAGCCTCATAGACATGAAGAACTAGCAGATCCTCTTCTGAAAGGGAACTTCCCTTCAAAAGCACTGAACCAAGCAGTGGCAATGGCAGCCATGTGCCTGAACGAGGAAGCTTCTGCGAGGCCATTAATGAGAGATGTAGTGAGTGCCCTTAGCTTCCTTGGGACAGACAGTATTAATGATTCTCAAGCAGGAGGATGA 1146 0.4223 MSCFACFSSHTEKRLSKKNGKNTDLSPSTTSVSLEASTQPRHETQNPNPKPTSQPTTEAETNKDAIKDIDGNNNIASQNFTFRDLAVATKNFRKETLIGEGGFGRVYKGRIEKINQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHENLVNLVGYCADGDQRLLVYEYMPSGSVEDRLLDVSLNQKPLDWNTRMKIALGAAKGLEYLHDKANPPVIYRDLKAANILLDKDFNAKLSDFGLAKLGPMGDKSHVSTRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGKRVIDTTRSTREQNLVNWAQPMFKEPHRHEELADPLLKGNFPSKALNQAVAMAAMCLNEEASARPLMRDVVSALSFLGTDSINDSQAGG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1032 381 MobiDBLite consensus disorder prediction 1 60 - -
Lele38g1032 381 SUPERFAMILY Protein kinase-like (PK-like) 76 367 IPR011009 -
Lele38g1032 381 MobiDBLite consensus disorder prediction 21 60 - -
Lele38g1032 381 Gene3D Transferase(Phosphotransferase) domain 1 169 378 - -
Lele38g1032 381 FunFam Serine/threonine-protein kinase PBS1 62 168 - -
Lele38g1032 381 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Lele38g1032 381 PANTHER OS07G0668900 PROTEIN 3 375 - -
Lele38g1032 381 Pfam Protein kinase domain 93 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1032 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele38g1032 381 CDD STKc_IRAK 98 366 - -
Lele38g1032 381 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1032 381 FunFam Serine/threonine-protein kinase PBS1 169 380 - -
Lele38g1032 381 Gene3D Phosphorylase Kinase; domain 1 63 168 - -
Lele38g1032 381 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1032 Lele-ChrLele38 21706436 21708411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1032 1 371 Glycoside Hydrolase AT3G07070 69.811 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele38g1032 Pkinase 1.8e-48 CL0016