Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1031 ATGGCATTGGAATACACGTGTGGTCTCAACTTTATGGCCAAAGGCCAATTCCTCATCTTCTTCACACAAACACGGACGCAAGAAATTGGAAGAGGAGCAGGTGGCATAGTGTACAAAGCATTATTGCCTGATCAACGTATCGCAGCAATAAAGAAGCTGAATAATGACTATGTTCGAGCCAAACGAGATGAAGGAGAATTTCTAGCTGAATTGAGCATAATCGGTAGGCTAAACCACATGAACTTGATCGAAATGTGGGGTTATTGTGCTGAGGGAAAGCATAGGCTTTTGGTTTACGAATACATGGAGAAAGATTTTGGCTTATCTAAGCTTCAAAATAGAAATGAGCAAAATGCTCAAAGCTTGTCAATGATAAGAGGAACAAGAGGATATATGGCGCCTGAGTGGATTTTCAACCAGCCAATAACGTCAAAGGTTGATGTGTATGGCTATGGGATCGTTGTGTTGGAGATGATAACAGGAAGGAGTCCAATGACGATGGAAATTCATAGTGGTGATGGTGGAGAAGAGGCTCATGAGAATGTGAGGCTTGTGACGTGGGTGAGAGAGAAGAAGAACAAAACGACGTCGTTAGAGGAAGGGTCATGTTGGGTAGAGCAGGTAATTGATGCTGCCATTGGATCAGAGCTTGACATTGATGCAATGCAAAAGATAGAAACTTTGGCAAATGTGGCTTTGAAGTGCGTTGAGGAAAACAAAGATGAAAGGCCGAGCATGAGCCGAGTTGTTGAGATGCTTCAAAGCCATGAAGATGATGCTTCTTTATTGTATGTTTCTTGTGGTTTGTGA 810 0.4247 MALEYTCGLNFMAKGQFLIFFTQTRTQEIGRGAGGIVYKALLPDQRIAAIKKLNNDYVRAKRDEGEFLAELSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEKDFGLSKLQNRNEQNAQSLSMIRGTRGYMAPEWIFNQPITSKVDVYGYGIVVLEMITGRSPMTMEIHSGDGGEEAHENVRLVTWVREKKNKTTSLEEGSCWVEQVIDAAIGSELDIDAMQKIETLANVALKCVEENKDERPSMSRVVEMLQSHEDDASLLYVSCGL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1031 269 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1031 269 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Lele38g1031 269 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 104 256 - -
Lele38g1031 269 Pfam Protein kinase domain 25 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1031 269 Pfam Protein kinase domain 105 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g1031 269 Gene3D Transferase(Phosphotransferase) domain 1 101 264 - -
Lele38g1031 269 SUPERFAMILY Protein kinase-like (PK-like) 25 259 IPR011009 -
Lele38g1031 269 Gene3D Phosphorylase Kinase; domain 1 29 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1031 Lele-ChrLele38 21699457 21702063 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1031 29 255 Receptor kinase-like Gene Family AT1G75820 25.517 1.49e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele38g1031 Pkinase 4.1e-18 CL0016