Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1029 ATGAGAAGAGGAACGAGAGGATACATGGCACCAGAATGGGTTTTCAATCTGCCAATAACGTCAAAAGTGGATGTGCATAGCTATGGGATTAGAGAAGAAGAAGACGAAGAACAAAACGTCTCGTCGGGATCTTGGGTGGAGCAAATAATTGATCCAGCCATGGCATCTGAGTTGGAGGTTGAGAAGAGTAAGATGGAAACTTTGGCACGTGTGGTATTGGAGTGCGTCAAGGAAGACAAAGATGCGAGGCCCACCATGAGCCAAGTTGTAGAAATGCTTCAGAGCCATGAAGAGTGA 297 0.4613 MRRGTRGYMAPEWVFNLPITSKVDVHSYGIREEEDEEQNVSSGSWVEQIIDPAMASELEVEKSKMETLARVVLECVKEDKDARPTMSQVVEMLQSHEE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1029 98 PANTHER OS07G0415500 PROTEIN 3 96 - -
Lele38g1029 98 Pfam Protein tyrosine and serine/threonine kinase 8 93 IPR001245 GO:0004672|GO:0006468
Lele38g1029 98 SUPERFAMILY Protein kinase-like (PK-like) 3 94 IPR011009 -
Lele38g1029 98 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1029 Lele-ChrLele38 21680062 21680468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1029 4 95 Receptor kinase-like Gene Family AT4G04540 34.259 1.82e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele38g1029 PK_Tyr_Ser-Thr 2e-07 CL0016