Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1012 ATGTGCAAAACAAACAAGAGTTCATGGGGCATGAGCATGAAGCTATGGTGGATGTTTGGGTTTGTAGGACTGGTGATTATCAAAGTGGTCGAGGGTTTCGACAGTGTCAGTGTGACAGATATGGATTATGTCAAGAGAAGGGGTTTCAATTACAGGCCCTTAATGGTGGGTATCACTCTAATTAATGAAGCTGCTGCCAAAGGCGCGGTTTGCCTGGATGGATCTTTACCAGCTTACCATCTTCACCGTGGTTATGGTTCTGGATCAAATAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAAATATCAAAACTTGTGAGTACAGTAAGAGAACTCGCCATGGTTCTTCCAATTTCATGGAAAAGCAGATTCCATTTGTTGGAATATTGAGCAACAAAGCTGAAGAGAACCCTGATTTTTTCAACTGGAATAGAGTAAAAATTCGTTACTGTGATGGTTCATCCTTTAGTGGGGACAGTCAAAATAAAGCCACAAATTTGTACTTCAGAGGACAACGCATCTGGGAAGCTGCTATGGAAGATTTAATGTCAAAGGGCATGCGCTTATCTAAACAGGCTCTTCTATCTGGATGTTCTGCTGGAGGTTTAGCATCTATACTTCATTGTGACGAATTTAGGGGACTGTTTCCGGCAACTACAAGAGTCAAATGCTTAAGTGATGCTGGATTGTTCCTTGATAGTGTTGATGTATCTGGCAGTCGCACTTTGAGGAGGACATTCAGAGATGTGGTTGCCTTACATGGAGCGGCAGGGAGCCTTCCAAGGAGCTGTACCAGTCACTTCAATCCGACTTTGTGCTTCTTCCCTCAGTATTTAATTTCCAGTGTCAGGACACCGCTATTTATTCTCAACACAGCTTATGATACTTGGCAGATTCAGGCCAGCATAGCGCCGCCATCAGTGGATCGTCGTTGGAATTGGGCTCAGTGCAGAAAAAATTATGCACGTTGCAGTGCATCACAGATTCATTATCTTCAAGGATTCCGAAATCAAATGCTTAATTCTGTGAGGGGCTTTTCAAGGGCTCGCAAAAATGGATTGTTCATAAATTCATGTTTCGCGCATTGTCAGACTGAAAGACAGGATACTTGGTTTGCCTACAATTCTCCCCATATTGGAAACAGAGGGATTGCACAATCTGTTGGAAACTGGTTTTTTGACAGAGTTGGAATACAGGCTATTGGTTGTGCATACCCTTGTGAAAAAACCTGCCATAATTTGGTCTTTCAGTGA 1260 0.431 MCKTNKSSWGMSMKLWWMFGFVGLVIIKVVEGFDSVSVTDMDYVKRRGFNYRPLMVGITLINEAAAKGAVCLDGSLPAYHLHRGYGSGSNSWLIQLEGGGWCGNIKTCEYSKRTRHGSSNFMEKQIPFVGILSNKAEENPDFFNWNRVKIRYCDGSSFSGDSQNKATNLYFRGQRIWEAAMEDLMSKGMRLSKQALLSGCSAGGLASILHCDEFRGLFPATTRVKCLSDAGLFLDSVDVSGSRTLRRTFRDVVALHGAAGSLPRSCTSHFNPTLCFFPQYLISSVRTPLFILNTAYDTWQIQASIAPPSVDRRWNWAQCRKNYARCSASQIHYLQGFRNQMLNSVRGFSRARKNGLFINSCFAHCQTERQDTWFAYNSPHIGNRGIAQSVGNWFFDRVGIQAIGCAYPCEKTCHNLVFQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1012 419 PANTHER NOTUM-RELATED 36 415 IPR004963 GO:0016787
Lele38g1012 419 Pfam Pectinacetylesterase 53 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1012 Lele-ChrLele38 21583165 21588411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g1012 55 419 Carbohydrate Esterase AT1G57590 69.041 0.0 550