Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0976 ATGGGCCGGGTCTATCCACCCGTTTTGGAAAGAGGCGCAACGCTAGGGTTCCCAAACTTGTATATCTTAGTTCAGGGTTTTAACAGAGGGCAGAGAGAGAGGGGTAGAGACGAGTTATGGCAATCTCTGTATGGATTTTTCTCTCATGAGCTTTTTTCTTCTTCCTCAGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGTCAACCAGCAAACACTAAGCTGTCAAGTAACAAGACAGTCAGGAGAATTCGTGTAAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACGGGAAATTATTCATGGGGTAGTGAAGCCGTGACTCGCAAAACACGTATATTAGATGTGGTTTACAATGCCTCAAACAATGAACTTGTGCGAACACAAACCCTTGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGTAGGAAGAAGAAAACAGCTGCCAAGAAGGATTCAGCAGAGGAGGGTGAAGCTGCTGCTGTTGAAGAGACAAAGAAAAGTAATCATGTGCTTAGAAAACTAGAGAAGCGTCAGAAAGACCGAAAGCTCGATCCCCACATTGAAGAGCAATTTGGCGGTGGCCGATTGTTGGCTTGCATTTCTTCTCGACCTGGGCAATGTGGCAGAGCTGATGGCTACATATTGGAAGGCAAGGAGTTGGAGTTTTACATGAAGAAGCTCCAGAGGAAGAAGGGAAAGGGTGCTGCTGCTTGA 825 0.4655 MGRVYPPVLERGATLGFPNLYILVQGFNRGQRERGRDELWQSLYGFFSHELFSSSSGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKDSAEEGEAAAVEETKKSNHVLRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAAA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0976 274 Gene3D Ribosomal protein S8e, subdomain 163 231 IPR042563 -
Lele38g0976 274 TIGRFAM eS8: ribosomal protein eS8 57 254 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele38g0976 274 MobiDBLite consensus disorder prediction 66 80 - -
Lele38g0976 274 FunFam 40S ribosomal protein S8 164 231 - -
Lele38g0976 274 PANTHER 40S RIBOSOMAL PROTEIN S8 57 270 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele38g0976 274 CDD Ribosomal_S8e_like 64 252 - -
Lele38g0976 274 ProSitePatterns Ribosomal protein S8e signature. 66 85 IPR018283 GO:0003735|GO:0005840|GO:0006412
Lele38g0976 274 FunFam 40S ribosomal protein S8 87 216 - -
Lele38g0976 274 Gene3D - 82 268 - -
Lele38g0976 274 Pfam Ribosomal protein S8e 60 252 IPR022309 -
Lele38g0976 274 MobiDBLite consensus disorder prediction 55 80 - -
Lele38g0976 274 FunFam 40S ribosomal protein S8 217 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0976 Lele-ChrLele38 21349981 21352254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0976 57 261 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.366 1.15e-125 354