Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0971 ATGGAGAACGAATTCTTCCTGAATGCTGCTTCCCTTCACTTCGAACCTTCTTCTTCCTCAATGCCCACGTGGCAGTCGCTCTCATCCGCCATGGATGTTCAAGTTCAAGCTTCCGTCCTCAATTGCTCTTCCGAGCAACCGCAAGATTGCTTTTACAACAACATAAAATGGGATAAGTCAACGGATCATCATGGTCTTCAATTCGATTCTGCTCTGAGCTCCATGGTTTCTTCGCCGGCAGCGTCGAATTCCAATGTTATGCCCAATAATGAGAATTTCATGATCAGGGAATTGATAGGGAAATTGGGCAACATTGGTGCTTCTCCTTACATTAATGGCGGTAATAGCACTGATACTTCGTGTTACAGCACTCCCTTGAGCTCGCCTCCGAAGATGAACATGATGAACCAACTGGTGAAAGAGAACTTGCCCAGTTTAGGGAAATCGATGGTTTTGAATTCTAATGTTGCAGAATTCTCATCTGATCCTGGTTTTGCAGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGAACATACCAACTAGGCATGAACAACGGTCAATTGTCTCTAAGATCTACTCCATCAATGGAAAATGAGAAGCTCGCTCGAGTTTCTAGTAGTCCTGCTCTGAAAGCACTCGGTGGATCTCAAACGGAAGTGGCGAATTCCCAAGAGGAATCAACCATCTCTGAGCAGACCCCAAATGGGGAAAATGGGGTGAATAATGCGAAATCAAGGAAAAGAAAAGCTTCTTCCAAGGGAAATAATACCAGAGAAACTTCAACTTCAATCAATCCTACTCCCAAGGCTAATGAAACCAAGGAAGATTCAAATGCAAAGCGCAGCAAGCCAAACGAGGTTGATCAAGGGAATGAAAATGGAACCGTGAAGGTAGAAGAAGACTCAAAAGGAGGTACTAGCAATGGAGGAGATGAGAAACAGACCAAGAGTAATAACTCATCAAAACCTCCTGAACCTCCAAAAGACTACATTCATGTCAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGTCTTGCAGAAAGAGTCCGGAGGGAAAAAATCAGTGAGAGGATGAAGCTTCTGCAAGATCTTGTACCGGGTTGCAATAAGGTCACTGGTAAAGCGCTCAAGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTTTTATCTATGAAACTGGCTTCTGTCAACACCAGGCTGGACTTCAACATTGACAATCTATTATCAAAAGATATGTTTCAATCAGATAACTCTTTGGCACACCCAACATTCCCTCTAGATTCCTCAGCACAAGCCTTTTATGGGCAACAACACACTCAGCAAAACCCAGGAATCCACAATAACATTCTTAATGGTATTGTGTCCCACAGCACAGTAGACCCATTAGAAACTGCTTCTCTGTGCCAAAACATGGGCATGCAATTACCTTCTCTTAATGGATTTAATGAAAGTGGTTCTTCTCAGTTTCCAGTAGGATTCTGTGAGGATGACCTTCAAACCTTTGTTCAGATGGGATTTGGGCAAAGTGGACAAGGAAAATCACCCAGTCATTCCCAGAACTTCAACGGTTCAAATCAAGTCACCCATCTGAAAGTTGAACCCTAA 1644 0.4361 MENEFFLNAASLHFEPSSSSMPTWQSLSSAMDVQVQASVLNCSSEQPQDCFYNNIKWDKSTDHHGLQFDSALSSMVSSPAASNSNVMPNNENFMIRELIGKLGNIGASPYINGGNSTDTSCYSTPLSSPPKMNMMNQLVKENLPSLGKSMVLNSNVAEFSSDPGFAERAAKFSCFGSRSFNGRTYQLGMNNGQLSLRSTPSMENEKLARVSSSPALKALGGSQTEVANSQEESTISEQTPNGENGVNNAKSRKRKASSKGNNTRETSTSINPTPKANETKEDSNAKRSKPNEVDQGNENGTVKVEEDSKGGTSNGGDEKQTKSNNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALKLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNIDNLLSKDMFQSDNSLAHPTFPLDSSAQAFYGQQHTQQNPGIHNNILNGIVSHSTVDPLETASLCQNMGMQLPSLNGFNESGSSQFPVGFCEDDLQTFVQMGFGQSGQGKSPSHSQNFNGSNQVTHLKVEP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0971 547 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Lele38g0971 547 Pfam Helix-loop-helix DNA-binding domain 349 396 IPR011598 GO:0046983
Lele38g0971 547 MobiDBLite consensus disorder prediction 279 313 - -
Lele38g0971 547 Coils Coil 392 412 - -
Lele38g0971 547 MobiDBLite consensus disorder prediction 216 247 - -
Lele38g0971 547 MobiDBLite consensus disorder prediction 314 330 - -
Lele38g0971 547 MobiDBLite consensus disorder prediction 261 278 - -
Lele38g0971 547 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 232 455 IPR024097 GO:0006355
Lele38g0971 547 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 414 IPR036638 GO:0046983
Lele38g0971 547 Gene3D - 342 417 IPR036638 GO:0046983
Lele38g0971 547 CDD bHLH_AtBPE_like 335 420 - -
Lele38g0971 547 SMART finulus 351 401 IPR011598 GO:0046983
Lele38g0971 547 MobiDBLite consensus disorder prediction 519 547 - -
Lele38g0971 547 MobiDBLite consensus disorder prediction 191 208 - -
Lele38g0971 547 MobiDBLite consensus disorder prediction 191 336 - -
Lele38g0971 547 FunFam Basic helix-loop-helix transcription factor 342 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0971 Lele-ChrLele38 21321889 21324429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0971 1 499 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 48.054 6.74e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele38g0971 HLH 3e-05 No_clan