Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0964 ATGTCATCTATGAACATCGGCGATGAGAGTCGCCACCAGCAGCACCGCACGTTCCCGGAGTTAGATTTTCAGGACATGAAGGTGATATCCGCCGTGGGCCGCGGTGCCAAGGGCGTTGTGTTCGCGGCTACGAGAAATGACGATGCGTCTGGTGAGTATTTAGCTTTGAAAGTGATCTCCAAGGCTTTGATTCAGAAGAAAGCGAAGGCGATGAACAACGGTGACGGCGAGTGCAAGAGGGTGTCGTTTGAACAGCATGTGCTGCGTCGTTTTGATCACCCGCTCTTGCCTAGGTTGCGAGGGGTTCTGGAAACCGAGAAGATCATTGGGTACGCCATCGATTATTGTCCCGGCGGAAATCTCCATTCTCTCCGGAAAAAGCAAACAGAGAAGATGTTTTCCGATGATAGCATCAGGTTTTATGCTGTCGAATTGGTCCTTGCCTTGGAGTATCTGCATAATTTGGGAATAGTGTACAGAGATTTGAAGCCAGAGAACATACTGATCCAAGAAAATGGTCACATAATGCTCGTCGACTTCGATCTATCCAAAAAACTAATCCCGAAATCTCCAAAATCCCAGAGTAGCTTCTCGTCGCCGATTTCCCACACGTCAAAGACGACGGCAATGAAGCACTTACGGAAGAAACGCTACTTCCGATTCTACAGTTGCACCGTGCCAACCCCCTCGTCGTACGAACCACAAGCCTCACCGGAATTCCAGTGTCCGCGGCGGAGCGAGTCAGACTCGGTGGAGAAATCGAACTCGTTCGTTGGTACGGAGGAATACGTAGCACCCGAAGTAATCACGGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCACTCGGCGTCGTTTTATATGAGATGCTGTACGGGACGACGCCGTTTAAGGGAGAGAACAGGAAAGAAACGTTTCACCGGATTATGACGAAAGAACCGGAGTTAACCGGAAAAAAGACGCCGTTGAGGGATCTGATCGCGAAGTTGCTGGAGAAGGATCGTGACCGTAGGATCGACGTGGAAGGGATCAAGGGTCACGAGTTCTTCATAGGGGTTCAGTGGGACTCGGTTTTGCACGTAGCACGGCCGCCGTATATTCCGTTGAATGAAGTAGGGGACACAAATGGGTTTAAGAAAAATCAAGTGGAGATATTTGTCCATGAGGTATTCTTTGGGAAGGATGGGGAGGAAGAAAAAGGGACCAAAAAAGAAGAAAATGATAATGATGAGGATAATAGAGAGGATAATAAGAACGTGTGGGTAGAGAAGTTGAGTCATCAGAGCCCCGCAGAGAATGAGAATTTTTTAATTTTTTGA 1320 0.4856 MSSMNIGDESRHQQHRTFPELDFQDMKVISAVGRGAKGVVFAATRNDDASGEYLALKVISKALIQKKAKAMNNGDGECKRVSFEQHVLRRFDHPLLPRLRGVLETEKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHNLGIVYRDLKPENILIQENGHIMLVDFDLSKKLIPKSPKSQSSFSSPISHTSKTTAMKHLRKKRYFRFYSCTVPTPSSYEPQASPEFQCPRRSESDSVEKSNSFVGTEEYVAPEVITGKGHNFGVDWWSLGVVLYEMLYGTTPFKGENRKETFHRIMTKEPELTGKKTPLRDLIAKLLEKDRDRRIDVEGIKGHEFFIGVQWDSVLHVARPPYIPLNEVGDTNGFKKNQVEIFVHEVFFGKDGEEEKGTKKEENDNDEDNREDNKNVWVEKLSHQSPAENENFLIF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0964 439 MobiDBLite consensus disorder prediction 397 422 - -
Lele38g0964 439 MobiDBLite consensus disorder prediction 231 253 - -
Lele38g0964 439 SMART serkin_6 26 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0964 439 Gene3D Transferase(Phosphotransferase) domain 1 250 369 - -
Lele38g0964 439 ProSiteProfiles Protein kinase domain profile. 26 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0964 439 PANTHER FLIPPASE KINASE 1-RELATED 15 376 - -
Lele38g0964 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele38g0964 439 FunFam Serine/threonine-protein kinase OXI1 252 369 - -
Lele38g0964 439 Gene3D Phosphorylase Kinase; domain 1 370 380 - -
Lele38g0964 439 SUPERFAMILY Protein kinase-like (PK-like) 27 372 IPR011009 -
Lele38g0964 439 MobiDBLite consensus disorder prediction 397 439 - -
Lele38g0964 439 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Lele38g0964 439 Pfam Protein kinase domain 252 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0964 439 Pfam Protein kinase domain 28 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0964 439 FunFam Serine/threonine-protein kinase OXI1 120 188 - -
Lele38g0964 439 Gene3D Transferase(Phosphotransferase) domain 1 120 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0964 Lele-ChrLele38 21249365 21250920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0964 7 439 AGC Kinase Gene Family AT3G25250 56.136 2.53e-152 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele38g0964 Pkinase 2.8e-32 CL0016