Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0919 ATGGTTCTGAGTAGCCGAACTTTCTCTGCTCATGTTAGTATTATTAATTTATTGTTGCTGCTTGGTTGTAGCATGACCTACGGGACTGTTACTGATATCTACTGCTTGAAAAATATACAAAATTCACTTGAAGACCCATATGGTTATTTGAAGTCTTCATGGGATTTCAACAACAACACAGAAGGATTTATCTGCAGATTCACTGGTGTTGACTGTTGGCACCCTGATGAGAACAAAGTCTTAAATCTAAAGTTGTCAAACATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAACTGCTCCAGCTTAACAGGATTGGATCTATCAATTAACAAACTCTCTGGAATAATCCCAGCAGATATCAATCATCTTGTTAACTTTGTGACAACTCTTGATCTATCTTCAAATGACTTTTCTGGGACAATCCCTGCAGGTCTTGCAAATTGTTCTTATCTTAATTCCCTTAAACTGGATCAAAATCGACTTACCGGGCAAATTCCTGGAGAATTGAGCACGCTTCCAAGGCTAAAGACATTTACTGTCACAAACAATCTTTTGACGGGGCCAATTCCAAACCTTCCGAACATCTCAGCTGTTGGCTATGCAAATAATGCTGGACTATGTGGTAAACCTTTGCCAGTCTGCGAGGCCTCATCCTCCAAGAGTAACTCTGCAGTTATAGTTGGAGCAGCTGTTGGCGGAGTGACAGTTGGATCATTAGTAATAGGTATTGGATTGTTCTTCTTTGTCAGACGAGTATCTGTGATTAAGAAGGAAGAAGACCCTGAAGGCAACAAATGGGCAAGAAGTCTAAAGGGAACTAAAGGAATAAAGGTTTCAATGTTTGAGAAGTCAGTTTCAAAAATGAAATTGAGCGATCTCATGAAGGCTACTAACAACTTCAGTAAAGGAAATATTATCGGGTCTGGAAGAACAGGAACGATGTACAAAGCTGCCCTTGATGATGGCGCATCACTCATGGTTAAGAGATTGCAAAAATCTCAACACTCTGAGAAAGAATTTCTGTCTGAGATGTCTACCCTCGGGGCTGTCAGACATCGTAACCTGGTTCCTCTTTTAGGTTTTTGCGTGGCCAAGAAGGAGAGGCTTTTGGTCTATAGTTTTATGTCAAATGGCACCCTTCATGATCAGCTACATCCTGCTGAAAGTCAGAGCACCCTAGAATGGCCTATAAGGCTTAAAATTGCTATAGGAGCAGCTAAAGCATTAGCATGGCTCCATCATAGCTGCAATCCCCGTATCCTCCATCGTAACATAAGCTCTAAGAGCATCCTATTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGACTGATGAACCCAATTGATACACATTTGAGTACTTTCGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGTACGCGAGAACACTGGTGGCTACACCCAAGGGAGATGTTTATAGCTTTGGCGTTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCCACCCATGTGGCTAAAGCTCCAGAAACTTTCAAGGGAAGTTTGGTTGAATGGATTACCCAACTCTCAAGCAACTCTGAACTGCAGACTGCCATCGATGAATCTTTAGCTGGGAACGAATTCGATCACGAGCTTTTCCAATTTCTGAAGGTTGCATGCAACTGTGTTTCATCAACTGCAAAGGAAAGGCCCACTTTGTTTGAAGTATACCAGTTTCTAAGAGCCATTGGGAGTAGGTACAATTTCACAACTGAGGATGAGATATTGTTACCCACAGATATTGGTGATGCTGGAAATCTAGAGGAACTTATTGTGGCTCGAGAATAA 1836 0.4199 MVLSSRTFSAHVSIINLLLLLGCSMTYGTVTDIYCLKNIQNSLEDPYGYLKSSWDFNNNTEGFICRFTGVDCWHPDENKVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGIIPADINHLVNFVTTLDLSSNDFSGTIPAGLANCSYLNSLKLDQNRLTGQIPGELSTLPRLKTFTVTNNLLTGPIPNLPNISAVGYANNAGLCGKPLPVCEASSSKSNSAVIVGAAVGGVTVGSLVIGIGLFFFVRRVSVIKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKGNIIGSGRTGTMYKAALDDGASLMVKRLQKSQHSEKEFLSEMSTLGAVRHRNLVPLLGFCVAKKERLLVYSFMSNGTLHDQLHPAESQSTLEWPIRLKIAIGAAKALAWLHHSCNPRILHRNISSKSILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELVTGERPTHVAKAPETFKGSLVEWITQLSSNSELQTAIDESLAGNEFDHELFQFLKVACNCVSSTAKERPTLFEVYQFLRAIGSRYNFTTEDEILLPTDIGDAGNLEELIVARE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0919 611 CDD STKc_IRAK 308 576 - -
Lele38g0919 611 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Lele38g0919 611 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 57 192 - -
Lele38g0919 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 263 376 - -
Lele38g0919 611 Gene3D Ribonuclease Inhibitor 31 217 IPR032675 -
Lele38g0919 611 Gene3D Phosphorylase Kinase; domain 1 263 376 - -
Lele38g0919 611 Gene3D Transferase(Phosphotransferase) domain 1 377 592 - -
Lele38g0919 611 Pfam Protein tyrosine and serine/threonine kinase 304 575 IPR001245 GO:0004672|GO:0006468
Lele38g0919 611 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lele38g0919 611 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0919 611 SUPERFAMILY L domain-like 30 197 - -
Lele38g0919 611 FunFam Leucine-rich repeat receptor-like protein kinase 377 587 - -
Lele38g0919 611 FunFam Nuclear pore complex protein NUP107 29 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0919 Lele-ChrLele38 20910282 20912637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0919 17 590 Receptor kinase-like Gene Family AT3G28450 46.575 8.09e-178 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele38g0919 PK_Tyr_Ser-Thr 2.1e-38 CL0016