Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0917 ATGACTTCATTTTTGAAGCCTGAGAATGCTCTGAAAAGAGCGGAAGAATTGATCAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTTCATGGCCTTATCACTTCAAAAAGATATAGGGCATGGCAGAAAACACTTGAAAGGATCATGTTTAAATATGTAGAACTTTGTGTAGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTCATTCAGTATCGAATTATATGTCAGCAAGTTAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACTGAGAAAGCTGAACAAGCTCGCAGCCAGGCACAGGCATTGGAAGAAGCTCTCGATGTTGATGATTTAGAGGCTGATAAAAGGCCGGAGGACTTGATGCTTAGCTATGTGAGTGGGGAGAAAGGAAAAGACAGATCCGACAGGGAGCTTGTTACTCCATGGTTTAAATTTCTTTGGGAAACATACAGGACTGTGCTTGAAATATTACGGAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCGCATCGGGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACTGAGTTCCGTAGACTTTGTGAAATTATAAGAAACCATCTAGCCAATCTTAATAAATATCGAGACCAACGAGACCGACCTGATCTTTCAGCGCCTGAAAGCTTGCAACTATATCTAGATACAAGATTTGAGCAATTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTAATGTGCATTGTCAAGAAAACGCCCAAGGCGTCTTTGATGGTTCTTTACTATGCTAAGCTGACAGAAATATTTTGGATATCATCGAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGCCAGAAGGATCTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCATCCCCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAACTTGAGGTTGGCCAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATAGCAGAGAAGTGCTTTCAAGGTCGGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCTTCTGGATCATGAATTTCTTCCCCTAGATCTGCCATCAAAAGTTCAGCCTCTGCTAACCAAAATATCAAAATTAGGGGGTAAGCTCTCCACTGCTTCTTCCGTCCCTGAGGTGCAGCTGTCTCAGTATGTCCCAGCACTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCCAATGTATACCAGACAATGAAGGTTGAGACCTTATCGGGAATGATCCCCTTTTTCGATTTTTCTGTAGTGGAAAAGATTTCTGTGGATGCTGCTAAGCATAACTTTGTATCCATGAAAGTTGACCACATGAGGAATGTTGTAGTTTTCTGCAAGACGAGTCTTGAGTCTGATGGCTTAAGGGATCATCTGGCTAATTTTGCTGAATTTCTGAATAAGGCAAGACAAATGATTTATCCTCCTGATGGGAAGCCTTCAAAACTTGGACCTTTGCTTCCCACTTTGAATGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAAAGAGAAGAGGAATCGAAGAGATTAAGACTGCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAGGCATTGCTTCAGGAAGCTGAGAAGCGCATTAAAAAGAAGGGAAAGAAGCCGATCATAGAGGGTGAAAAACTGACCAAGCAAACACTGATGGAGCTGACTTTGACTGAACAACTCCGCGAAAGGCAAGAAATGGAAAAGAAACTGCAAAAACTAGCTAAAACGATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAAAAGCACCTAGTTGAAGAAAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCGAGGAGAAGGAAAGACTGGCTCGTATGGTTGGCAATAAAGAGATTTATCAGGAGAGAGTTGTCAGTCGTCGCCAGGCAGAATTTAATAGATTGAGGCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGTCCAGAAGACAAGAGAGGGAAAAGATGAGGAAGTTTAAGTATTATCTGAGGTTAGAAGAGGAGAGACAGCAAAAATTGCATGAAGAGGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCGCTTGGCAAAATTGGCTGAGATAGCAGAAAAGCAGAGGCAAAGAGAGCGGGAACTCGAAGAGAAGGCAGAGAGGCAGAAGAAAGAAGTCCTGTTTGGCAGAAGTGGTGAGGTAGCTGTGAAGCCTCTTGAACCTTCAGCCCGCCCATCGGAGGCTGGTCCTACCTCTGCCACTCCTGCAGCAGCTCCTGCCGCTGCTGCAGGAGCAGCTGCACCAACCCTTGGGAAATACGTCCCTCGGTTCCGGCGTGAGAAAACTGAAGCCCCAAGCCCTGCACCGCCTCCAGAAACTGATCGATGGACAAACTCCAGCAGGCAGGATGGAGACAGATGGCGTAGCGATGATCGAAGGCCTGCTTTCGGTGCTGGTGGGGGTTCACGGTCATCATCAACATGGTCCTCATCCAGGCGTGGATCTGATCGTTGA 2910 0.4454 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVHPHDHTQGASHLELEHEKERNLRLANLIGFNLESKPDSREVLSRSALLAELVSKGVMSCATQEVKDIYHLLDHEFLPLDLPSKVQPLLTKISKLGGKLSTASSVPEVQLSQYVPALEKLATLRLLQQVSNVYQTMKVETLSGMIPFFDFSVVEKISVDAAKHNFVSMKVDHMRNVVVFCKTSLESDGLRDHLANFAEFLNKARQMIYPPDGKPSKLGPLLPTLNEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKLTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKHLVEEKLLHEREQQLEIEVSKQCHEGDLEEKERLARMVGNKEIYQERVVSRRQAEFNRLRREREERISRILQSRRQEREKMRKFKYYLRLEEERQQKLHEEEEARKREEAERRKKEEAERLAKLAEIAEKQRQRERELEEKAERQKKEVLFGRSGEVAVKPLEPSARPSEAGPTSATPAAAPAAAAGAAAPTLGKYVPRFRREKTEAPSPAPPPETDRWTNSSRQDGDRWRSDDRRPAFGAGGGSRSSSTWSSSRRGSDR 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0917 969 MobiDBLite consensus disorder prediction 804 862 - -
Lele38g0917 969 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Lele38g0917 969 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 969 IPR027512 GO:0005852
Lele38g0917 969 Gene3D UVR domain 217 267 - -
Lele38g0917 969 Coils Coil 93 120 - -
Lele38g0917 969 Gene3D - 268 342 - -
Lele38g0917 969 Gene3D - 352 493 - -
Lele38g0917 969 Coils Coil 667 697 - -
Lele38g0917 969 MobiDBLite consensus disorder prediction 930 945 - -
Lele38g0917 969 Coils Coil 615 649 - -
Lele38g0917 969 MobiDBLite consensus disorder prediction 804 969 - -
Lele38g0917 969 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Lele38g0917 969 Coils Coil 561 602 - -
Lele38g0917 969 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lele38g0917 969 Pfam PCI domain 373 508 IPR000717 -
Lele38g0917 969 MobiDBLite consensus disorder prediction 952 969 - -
Lele38g0917 969 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Lele38g0917 969 Coils Coil 796 857 - -
Lele38g0917 969 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 958 IPR027512 GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0917 Lele-ChrLele38 20896824 20902161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0917 1 968 Eukaryotic Initiation Factors Gene Family AT4G11420 71.907 0.0 1326