Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0907 ATGACTCAGATTCTCTGTTCAAAACCAGTTCTTTCTTCAGGACGCAGGATCCTTCACGAGCCATTTCAGCCATTGGGTTCTCTTCCTCCTGCTCCGCCTCCTAATCCTCCTCCTCCTTCCCCTCCGGCACCACCCAACGCTAAATACCCCTTTTCCACGACTACCCCTAATCAATCTCCGTTTTTCCCTAACTACCCTTCACCTCCTCCTCCTCCTCCTTCTCCCGCTTCTTTTGCTTCCTTCCCAGCCAATATCTCCTCTCTTATACTCCCTCACGCATCTAAATCCAAATCCTCTTCCGGTAAACTGCTTGGAGTTGCCATTGGTGCTGGGGTCTGTGCTATTGTTGTCGCCGGCATTTCTGCTTTTGTGTACTGTCGGCGGAGGAGCAGGCGGTACTCTGCTGATGAGAAAACTCTCAGATCCGATAGTAGTCTCCGGTTGTTCCCGCCCAGTGCTGAATCTGGTAATGGAGGTCGAAAGGTGAGGCACACTTCTTCGACTAGCTCTGAGTTTCTGTATCTTGGTACCATTGTTAATTCGAGGGGTGTTGAGGATCGTTCTGGTTCGCGAGCAAACGATGCTGGTCGGGGTGGACGTAGTGGCGGTGTTGGCGGAGGAAGTGGTGGTGGTGCTGCTGCTGTGGACCCTCGGAAAATGGACTCGCCTGAGCTGCGTCCACTTCCGCCGCTTGCTCGGCAAGGTTCGAGGCAGCAAAATGGAGTGGCGCGTGACGATGTGGGTTCCAATTTGGCGGACGATGAGGAAGAGGAATTCTACTCGCCAAAAGGGTCTCTGGGTGGTCACGAGAGTTCAAATGGCACTGGATCAGGTTCTCGTAGAGTGTTTGCGGCGATTGCAAGCGACAATTTTGTGGGTCGAAGCAGTGAATCGAGTTCTAGCTCGTATTCTTCTTCCACTTCGGGCTCACCCCATCGATCCCACTCGATTAGCCTATCACCGCCGGCGAGCTTGAGCCCCAAAAGATCCCAGCCGAAATCACCGGAATCTATTGTGGTGGACAGCTCTCCTCTGCTGGCATCATCTCCACCGCTACCACAGCCACCACCGCCTGCTCATCCTCAGACTGAAGCACACTCAGTCGAGGGATCTTTACGCTCATCGTCAGATAGAAGCCAATTTTCTTTATCTCCGGTTCACAATCAGCATGTTCAATCTTCTTCAAGGTCTTCGTTATCTTCAACACCAGAGAGAGCTTATGGCCGAGATGGTAAGTCTCCTTTGCTGTCTCCACTCTCGTTATCACCAAATAGAGCTGTAGGGAAGAAACCAGATGGGGAAGCGAGAGCATCAGGCGTCACATTTGAAAATGTGCATTCTTGGTCTTCCTCATCTCCTGTTTCTTCATCGCCTCAGAGATGTGTTGAGAAAAAATCAGATGCAGCAGAGAGACAAGATGAGATATTTTCTTATTCGTCATCAGGATTACCCAATGCATCACCAGATAGAAATGCTGAGAAAATTTCACGCGAATCACCAAGAGTATCCACTACCTCACCGGAAAGGAACGTGGAGAAAATTTTATCTTCACCGCAGAGAAATTCTGAGAAAATTTCCCTCGAGTCTCCAAGATTATCCACTGCATCATGTGAGGGAGGTGCGGAGGCAGTATTATGTGCATCACCAAGATTATCCAATGCATCATCGGGGAGAAATGTGCAGAAAATATCATGTGCGTCACCGAGATTATCCAATGCTTCGAATCAAAGTGAGAAGTCTCTGTCGTCTTCTTCAGCTTTCTCTCTGCCATCCTCACCTGAGAAAGTGGTTGAGCATGGTTTGGATCAGTCTCCAAGTCTATCAAATGTTTCAGATCGTTATAGGCAATCTCCTATGCCAAACCTGCTTTCATCGCCAGAAAGAGAATCGTACAACACTTCAGTTCATTCTGCTACAGTTGAACGTGTTCTGGATCAAACCAGAGATTCTCCAGCTCCTCCACCTCTTCAACCACAGCGAAAACACTGGGAGATTCCCATCCTCTCATCAATTTTTGGTCAACCAGAAAGAGTAGATAAAGTTTTGGATCAAAATACAGAATCTCCAGCTCCTCCTACACCACCACAGCGGAAACATTGGGAGATTCCAGTTTTCTCAACACCGATTGCTCAGCCTAAAGTTTCTCCCCCTCCCCCTCCACCTCCACCACCTCCACCTCCACCTCTGCCAGCCCACCAACGAACACGAAAGCAATGGGAAGTTCCATCTCCTTCAACACCCACTGATCAGTCAGTTTCTTGGCCGCCAGCACTAGTGCCACCTTCAAAGCCTTTTGTGTTGCCAAATCCAACTACGGATGTGTCTCCAGTTCAGTTACCTCCAAATTCTCAAGAACAGAATTTGGGGATAAATGAGGAGACTCCAAAACCAAAGTTGAAGCCATTGCATTGGGATAAAGTGAGAGCCAACTCTGATCGTGAAATGGTCTGGGATCAGTTGAGGTCAAGCAGTTTTAGATTAAACGAGGAAATGATTGAGACATTGTTTGTTGTCAATACACCAACTCCCAAATCAAAGGAAACTACACCGCGTTCAGTTCTTCCTACACCAAAGCAGGAGGACAGAGTACTTGATCCTAAAAAGTCACAAAATATTGCAATTTTACTGAGGGCACTTAACGTGACTGTTGAAGAAGTTTGTGAAGCATTATTAGAAGGTAGTGCTGATACGCTTGGAACAGAACTACTCGAAAGCTTGTTAAAGATGGCACCAAGTAAGGAAGAAGAACGTAAATTGAATGAGCATAAAGAAGACTCACCAACCAAGCTTGGTCCTGCAGAGAAATTCTTGAAGGCTGTGCTTGATGTACCATTTGCGTTCAGAAGGGTGGAAGCCATGCTTTACATAGCTAATTTCGAGTCTGAAGTGGAGTATCTCAGGAAATCGTTTGAAACTCTAGAGGCTGCCTGTGAGGAGCTACGCAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCACGCGCCTTCAAGCTTGATACACTTCTCAAGCTTGTTGATGTTAAAGGTGCCGATGGGAAGACCACCCTACTGCATTTCGTTGTACAGGAAATTATAAGAACTGAAGGTTCTCGTCTTTCGAGTACTTCACAAACGCCGAACTCCTCCTCTTTGAGTGAAGAAGCCAAGTGTAGGAGGCTTGGTCTACAGGTTGTTTCCAGTCTGAGTTCAGAGCTAGCAAGCGTAAAGAAGGCTGCTGCAATGGATTCTGAGGTTCTTAATGGTGATGTCTCCAAACTTTCTAAAGGAATTTCTTACATAACAGAGGTGGTGAAACTAAACGAAGCAACAAAACACGATGAAAGTGGTAAAAAATTTACAGAATCAATGAACAAATTTATGAGGACGGCTGAGGAGGAGATCCTGAAGATTCAAGCCCAAGAAAGTGTTGCCCTTTCCTTAGTGAAGGAGATTACTGAGTATTTCCATGGTAACTTGTCAAAGGAAGAAGCTCATCCATTCAGAATCTTCATGGTGGTAAGAGACTTCTTATCAGTTCTCGACCGAGCTTGCAAAGAAGTTGGTTTAATAAACGAGAGGACCATGGTTAGTTCTGCCCATAGATTCCCAGTTCCAGTAAATCCCATGCTTCCACAACCGTTAAACCCTATGCTTCCACAACCCCTACCTGGATTATTTGGAAAGAGACAATACAGCTCTTCAGATGATGATAGTCCCTCTCCATAG 3753 0.4687 MTQILCSKPVLSSGRRILHEPFQPLGSLPPAPPPNPPPPSPPAPPNAKYPFSTTTPNQSPFFPNYPSPPPPPPSPASFASFPANISSLILPHASKSKSSSGKLLGVAIGAGVCAIVVAGISAFVYCRRRSRRYSADEKTLRSDSSLRLFPPSAESGNGGRKVRHTSSTSSEFLYLGTIVNSRGVEDRSGSRANDAGRGGRSGGVGGGSGGGAAAVDPRKMDSPELRPLPPLARQGSRQQNGVARDDVGSNLADDEEEEFYSPKGSLGGHESSNGTGSGSRRVFAAIASDNFVGRSSESSSSSYSSSTSGSPHRSHSISLSPPASLSPKRSQPKSPESIVVDSSPLLASSPPLPQPPPPAHPQTEAHSVEGSLRSSSDRSQFSLSPVHNQHVQSSSRSSLSSTPERAYGRDGKSPLLSPLSLSPNRAVGKKPDGEARASGVTFENVHSWSSSSPVSSSPQRCVEKKSDAAERQDEIFSYSSSGLPNASPDRNAEKISRESPRVSTTSPERNVEKILSSPQRNSEKISLESPRLSTASCEGGAEAVLCASPRLSNASSGRNVQKISCASPRLSNASNQSEKSLSSSSAFSLPSSPEKVVEHGLDQSPSLSNVSDRYRQSPMPNLLSSPERESYNTSVHSATVERVLDQTRDSPAPPPLQPQRKHWEIPILSSIFGQPERVDKVLDQNTESPAPPTPPQRKHWEIPVFSTPIAQPKVSPPPPPPPPPPPPPLPAHQRTRKQWEVPSPSTPTDQSVSWPPALVPPSKPFVLPNPTTDVSPVQLPPNSQEQNLGINEETPKPKLKPLHWDKVRANSDREMVWDQLRSSSFRLNEEMIETLFVVNTPTPKSKETTPRSVLPTPKQEDRVLDPKKSQNIAILLRALNVTVEEVCEALLEGSADTLGTELLESLLKMAPSKEEERKLNEHKEDSPTKLGPAEKFLKAVLDVPFAFRRVEAMLYIANFESEVEYLRKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDARAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGSRLSSTSQTPNSSSLSEEAKCRRLGLQVVSSLSSELASVKKAAAMDSEVLNGDVSKLSKGISYITEVVKLNEATKHDESGKKFTESMNKFMRTAEEEILKIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLSVLDRACKEVGLINERTMVSSAHRFPVPVNPMLPQPLNPMLPQPLPGLFGKRQYSSSDDDSPSP 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0907 1250 SMART it6_source 789 1204 IPR015425 -
Lele38g0907 1250 ProSiteProfiles Formin homology-2 (FH2) domain profile. 789 1215 IPR015425 -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 841 862 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 768 791 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 710 732 - -
Lele38g0907 1250 Pfam Formin Homology 2 Domain 792 1189 IPR015425 -
Lele38g0907 1250 SUPERFAMILY Formin homology 2 domain (FH2 domain) 718 1201 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 25 49 - -
Lele38g0907 1250 Gene3D Formin, FH2 domain 790 1198 IPR042201 -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 291 344 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 348 362 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 473 487 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 184 533 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 61 77 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 367 404 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 134 166 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 841 855 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 567 591 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 567 798 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 738 755 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 17 77 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 602 641 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 442 462 - -
Lele38g0907 1250 Coils Coil 956 983 - -
Lele38g0907 1250 MobiDBLite consensus disorder prediction 498 533 - -
Lele38g0907 1250 PANTHER FORMIN-RELATED 500 1235 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0907 Lele-ChrLele38 20792980 20798069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0907 13 335 FH2 protein (formin) Gene Family AT3G25500 44.379 2.35e-26 115