Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0899 ATGGCTCCCTCGTCTCCGATCGGTGCTGACTCACTTCCCTCGTCAACGGCACCCCAAAACATGGAGAACAACATTCAACCGTTCTATGTTCTTCATAAAGCTCCATCTCGAGGAAAAGATAGAAAATCAACGGGACAGGGAAGAAAGAGAAGAAGAAAAGATGAACCTTCATCTCTGCAAAGTCCTAAGAAACTTGAAGGGAGTATTGCGGAAGAACATGGTGGCCATCATCTTCAGCAATTGCAATTTGAAGCATTTTGCTTTATTTGGTCAAAAATTGAGTCTACTATCAAGGACGTTTTGAGAGATATCAATGCTAGTGTTTTTGATGAAATACGACAATGGGTTCTGGAGTGCTTCAATGCTACTAGATCAACTGGAGAACCTAGCTTTGCCAACTCAATTGGATCTTTTCCTGTTCTGAACGAAAGTACTCCTAGACAGCTATTCACTGGGTTGGTTGTTACCAAAAACATGGAGTTTGTTGATGACATTTTGACATTTGAAGAGCTTAGTCTCTTTTTGAAATTGCAAGGCTGCCATGTGGGTATGCTATCATCCTTAGACTTTTCAGTGAAAAATGGGATTGCTGGTTGCCTAAAAGCTTTGTTGCGACAGTTTATGGACACCGCAATGGATTCAGCTGATATATCAAACTTAGCATCATGGTATAGAGAACATGGAAACTACAATAAACCCCTGGTTCTAATCATTAATGATTTGGAAAGATGCTCTAGGACTGTCTTATCTGATTTTATTCCCATGTTAAGTGAATGGGTAAACAGGTTGCCAGTGATCTTAATATTTGGAGTTGCGACCACAGTGGATTCCCTAAGAAACATTCTTCCATCACATCTTCTTCACCACTTGTGCACCTGTAAGTTTATACTTGGATCACCAGCTGACAGAATGGATTCAATAATTGAGGCTGTTCTTGTGAAGCATTGTGCTATATTCAGTATTGGTTACAAGGTGGCACTATTTCTTAGAAACAACTTCTTAAACAAGGATGGGACTTTAACATCTTTTATCCGAGCTTTGAAGATAGCTTGCATGTTACATTTCTCTGGGGAGCCTCTGAGTCTCATACTTAGCCAAGCACTCGCTGAAGAAGACCAGGAAGATGGAAAATTTGCAATATCACCTGATACGCTGTTGAAGAATATGCATGAACTTCCATCATGTGCAAGGAATCAAATGGCTGATGAGACTGGGAGAAATTTAGCTCAGGGCTTGTCAAATTTGGTCACAGTGAAGAAGCTTTGGAGCACTACAGTCTTGTGCCTGCGTGAAGCCGGAAAATACAATAGAGTTCGATTGCTGGACTTGTTTTGTGAAGCGCTCAATCCAGATTTGTTCCCATCAAAGGCTTCTGATTGTCATGCGGCAAATGAAAATTATTGTGGCTTGTCATCATCCAATTCCTCCCAACAGTGTTCTATCATTCAAAAGGGCGGATGTATTTCCCAGATAGCTCGCAAAGTGAGGGATCTTCCTCCTGCAACGCTATTTCAGTTGATTAAGAGCTGGGAAAACTGTACTGCAGGTGTTTTTGAGATTCATGACATATTAAAAACGTTGCAATCTTCACTAAGATGTGAAGATGGAAAAAGGCCAACCAAGAGTTATGACATTTCCAAGAAGCATGCGACCAGGATTTCATTAAACAATGAAAAGGACTCAAGAATCTTAAATTCACAAGTTGTCGCGTTCATCAATGACTTAGTTAGGAGTTACATGAGGCCCATTTCATGCATTCCTTTCCATGAAATTTCCTGTTTTAATGAGGTTGATAAGCTACAACTGGCTCTGACTGGAGATCCAAGAAGCAGAATTCAAGTTGACCTTTTGGACTTCAATAAGATTTTACGGTGCAGTTGCTGTAAAAAGAGTAGCTCTGCACTATTGCCATCCATGCACGATTCCTCAATTATGTATTCCCTGGCTGAGGAGCATGGGGATCTAATCAATCTTCATGACTGGTTCAAGTCCTTTAAAACAATTATTCTTGACCACAAGAATAAGCGCAAACAAAAGTTGAAGCAATCCCCACATAAAAGGAAGAGAAAAGATACAAATGAATCTAGTGATCCAAGTGAAGCATCTATTCAAGCACGTTTTTGCAATGCAGTTACAGAGTTGCAGATCATTGGCTTACTAAGAATGCCTAGCAAGAGACGCCCTGATTGTGTACAGAGAGTAGCCTTTGGAATTTGA 2217 0.4046 MAPSSPIGADSLPSSTAPQNMENNIQPFYVLHKAPSRGKDRKSTGQGRKRRRKDEPSSLQSPKKLEGSIAEEHGGHHLQQLQFEAFCFIWSKIESTIKDVLRDINASVFDEIRQWVLECFNATRSTGEPSFANSIGSFPVLNESTPRQLFTGLVVTKNMEFVDDILTFEELSLFLKLQGCHVGMLSSLDFSVKNGIAGCLKALLRQFMDTAMDSADISNLASWYREHGNYNKPLVLIINDLERCSRTVLSDFIPMLSEWVNRLPVILIFGVATTVDSLRNILPSHLLHHLCTCKFILGSPADRMDSIIEAVLVKHCAIFSIGYKVALFLRNNFLNKDGTLTSFIRALKIACMLHFSGEPLSLILSQALAEEDQEDGKFAISPDTLLKNMHELPSCARNQMADETGRNLAQGLSNLVTVKKLWSTTVLCLREAGKYNRVRLLDLFCEALNPDLFPSKASDCHAANENYCGLSSSNSSQQCSIIQKGGCISQIARKVRDLPPATLFQLIKSWENCTAGVFEIHDILKTLQSSLRCEDGKRPTKSYDISKKHATRISLNNEKDSRILNSQVVAFINDLVRSYMRPISCIPFHEISCFNEVDKLQLALTGDPRSRIQVDLLDFNKILRCSCCKKSSSALLPSMHDSSIMYSLAEEHGDLINLHDWFKSFKTIILDHKNKRKQKLKQSPHKRKRKDTNESSDPSEASIQARFCNAVTELQIIGLLRMPSKRRPDCVQRVAFGI 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0899 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Lele38g0899 738 Pfam Origin recognition complex winged helix C-terminal 609 736 IPR040855 -
Lele38g0899 738 MobiDBLite consensus disorder prediction 1 64 - -
Lele38g0899 738 MobiDBLite consensus disorder prediction 8 26 - -
Lele38g0899 738 MobiDBLite consensus disorder prediction 675 700 - -
Lele38g0899 738 MobiDBLite consensus disorder prediction 49 64 - -
Lele38g0899 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 68 215 IPR045667 -
Lele38g0899 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 229 362 IPR045667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0899 Lele-ChrLele38 20700848 20710522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0899 1 707 Core DNA Replication Machinery Family AT5G16690 44.755 0.0 580