Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0891 ATGGCTGGAGGAGGAGGGGAAGAAGAGAAGAACTTATACACTCCAACATGGGTTATTGCTGTCGTTTACACAGTCGTCGTCGCCGTTTCATTTGCTGTGGAACGTTGTCTTTATTATGGCGGAGTGTTCCTCGAGAAGAAGAAGAAGAAGTCCCTAAACGAAGCTCTTCAGAAAGTCAAAGAAGATCCGCAACCAAGGAGCAACCATGTTCTGATGGTTTGGTTGCATTCTTTTTGGAAGCAATTTTATGGCTCTGTAAATAAATCGGATTATGTGAAGTTAAATAAGGAATATCAAGATTTGTATGTTTCTTTGTTTTCGACTTGCAAGGCAAGTCCCAAGGTTAATTTTCATCAACACATGATAGAGGCCATTGAAGATGATTTTAAACAAGTTTTTGGAATAAGTTGGTACCTTTGGATCTTTGTGGTTATCTTCATTGTACTTAGTGTTAATGCTGTGGGCACTAAGTTGGAGCATGTTCTAATGCAATTAGTTCATGAGGTAGCTGTAAGGCATGCTGCTGCTGATGATGCCATTGAAAGCCAATCGAACGTTGATCGACAATCAGATAATCACTTTTGGTTTCATTGGCCTCGCTTCGTTCTCTTCTTGATTCACGTCATCCTCTTCCAGAACTCTTTTGAGATTGCATTCTTTTTCTGGATATGGGGTATTCATTCAGGTCCATTGCAGCTACAACACGCTGCCTCTGTATGCACTCGTTACACAAAAAAGAATTTCCCCCTTTCTTCTGTGAAAGTTGAGATGAAATCAGAACTTGCTGAGGAGTTGAGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAAAGGTTATTGAAAGATGAAGCTTGTGCTATTGGGCGACAAGATATTTCAAGTGTTGTCATCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGTGGAAGCACGAAACATGGTGATTATAGGCATCTTGATCCCAAAGAGGTTGAGAATCGTGGCCTTTATGGTGGTCGTGATCTTTTAGTTTCATATATGGCCTATGAACGAAGGAAACATTATTCAGAAAATGTTTGTGCAATGGAAGACACATCATCTTAG 1107 0.402 MAGGGGEEEKNLYTPTWVIAVVYTVVVAVSFAVERCLYYGGVFLEKKKKKSLNEALQKVKEDPQPRSNHVLMVWLHSFWKQFYGSVNKSDYVKLNKEYQDLYVSLFSTCKASPKVNFHQHMIEAIEDDFKQVFGISWYLWIFVVIFIVLSVNAVGTKLEHVLMQLVHEVAVRHAAADDAIESQSNVDRQSDNHFWFHWPRFVLFLIHVILFQNSFEIAFFFWIWGIHSGPLQLQHAASVCTRYTKKNFPLSSVKVEMKSELAEELRLTEKQVSGWFCHRRLKDKRLLKDEACAIGRQDISSVVIQDHGSGLGQDSCGSTKHGDYRHLDPKEVENRGLYGGRDLLVSYMAYERRKHYSENVCAMEDTSS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0891 368 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 256 368 - -
Lele38g0891 368 SMART HOX_1 225 290 IPR001356 GO:0003677
Lele38g0891 368 Gene3D - 241 292 - -
Lele38g0891 368 ProSiteProfiles 'Homeobox' domain profile. 256 286 IPR001356 GO:0003677
Lele38g0891 368 CDD homeodomain 256 285 IPR001356 GO:0003677
Lele38g0891 368 Pfam Homeodomain 253 285 IPR001356 GO:0003677
Lele38g0891 368 SUPERFAMILY Homeodomain-like 252 294 IPR009057 -
Lele38g0891 368 Pfam Mlo family 13 62 IPR004326 GO:0006952|GO:0016020
Lele38g0891 368 Pfam Mlo family 66 224 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0891 Lele-ChrLele38 20628456 20637316 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0891 3 62 MLO family AT4G02600 61.667 2.41e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele38g0891 Mlo 1.4e-35 No_clan