Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0868 ATGGCTGGAGGAGGTTTCTTTGAAGGCAGCCTGGATGATTTTGAAGCCAAGATCAATGTGCTCCTAATTACTTCATCCATAATGGCCTCCATTGAGTGGTTCATGTTTGGATACGATTCAGTTTTAGATGTTAGACAGAAATTTCAGTTTCAAATTTCTGGAATAGTTCATTCTGTTTCGCTGCTCTCTGCTATTAGGGTTTCGATTTCCGAACTGCATAGAGTGAGAACAAGCATGCATTCGAGCCAGTTCGACGGCGCCGAAGCCTTCTCCGGCGGTGGTTTTATGCCTTCTCTGGCAACTCAAGGCAATGAACCTTCCTTCTCCTACTCCAAGAATCGTGACGCTCAGTCATTGCTTCCTCTGACAGTCAAGCAGATAAATGATGCATTTCAGTCAATTGATGATAAGTCTAGTATGATTATCGATGGCGTGGATGTTAATAACGTCACTCTTGTAGGAAGGGTGTGCAACAAAGCTGGAAGGATTACTGATGTTACTTTTGTACTAGATGATGGGACCGGAAGGATTGAGTGTAGTAAATGGCTCCAGGAAGACGTAGACACCAATGAAGCAGAGGGTATCAGGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGACCTTAAATGTATTCTCTTTTAGGCCTTTGAACGACTTTAATGAGATTGCAAGTCACTTCATTGATTGTATATACGTCCATCTCTACAATACCAGGATACGGAGTAGTGTGCCAAATCAGCAATCTATGAACAATTCCTTACCTATTAATCCCACTAGAGGTTATCAAGCTACCCCTTCAAATCAATTCTCTGGTCAGCCCAATAATGGTCAGAAGAGTGTTGAAGATATGGTCTTAGATATCTTGCATCTTCCCTCGAACAGGGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACAGCATCTTGGAATTCCCTTGGATAAGCTCATGTTATCCATAAAAAATCTTATTGAGGAAGGCGCCATTTATGAAGCTATAAATGATCATTACAAGTCAATTGTCAATGGTTGA 1056 0.4195 MAGGGFFEGSLDDFEAKINVLLITSSIMASIEWFMFGYDSVLDVRQKFQFQISGIVHSVSLLSAIRVSISELHRVRTSMHSSQFDGAEAFSGGGFMPSLATQGNEPSFSYSKNRDAQSLLPLTVKQINDAFQSIDDKSSMIIDGVDVNNVTLVGRVCNKAGRITDVTFVLDDGTGRIECSKWLQEDVDTNEAEGIRDGMYVRLHGHLKGFQGKRTLNVFSFRPLNDFNEIASHFIDCIYVHLYNTRIRSSVPNQQSMNNSLPINPTRGYQATPSNQFSGQPNNGQKSVEDMVLDILHLPSNRAKEEGVSRDLIAQHLGIPLDKLMLSIKNLIEEGAIYEAINDHYKSIVNG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0868 351 CDD RPA2_DBD_D 149 242 - -
Lele38g0868 351 MobiDBLite consensus disorder prediction 253 284 - -
Lele38g0868 351 FunFam replication protein A 32 kDa subunit A-like 112 246 - -
Lele38g0868 351 Pfam Replication protein A C terminal 241 343 IPR014892 -
Lele38g0868 351 PANTHER REPLICATION PROTEIN A-RELATED 83 348 IPR040260 -
Lele38g0868 351 SUPERFAMILY "Winged helix" DNA-binding domain 283 348 IPR036390 -
Lele38g0868 351 Gene3D - 281 349 IPR036388 -
Lele38g0868 351 Pfam OB-fold nucleic acid binding domain 150 222 IPR004365 GO:0003676
Lele38g0868 351 Gene3D - 111 246 IPR012340 -
Lele38g0868 351 SUPERFAMILY Nucleic acid-binding proteins 119 246 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0868 Lele-ChrLele38 20368356 20376195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0868 81 348 Core DNA Replication Machinery Family AT2G24490 46.182 3.10e-76 234