Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0867 ATGTCTCATTTCGCTTCTTCATCCTCTAATTCGGGATTCACTTTTGAGTACGACGTCTTCTTAACTATCAGCCATCCCAAACATCATGTGAGAGCCAACTTGGAGAAGGACTTGAGAGATGTTGGAATCAAAGCTTTGATTGATGATCCGATACAGGAGTTTCTCATGTACGAGATAGTAAAGTGCAGAATGGTTGTGGTTGTTTTCACACCAGAGTTCCTTGAGTCCGACATATTTCTCAAGGGACTTGTGAATATAAGACGGTGTCAAAAACTTACGCATATAAAAGTGTCGCCTGTATTCTGTGGATTAAGCGAGGAGCAAGTACGTGAGCAGTTGGGGGGTGTGGATCGGAGAAGATTAGATAATTGGAATTTGGATTTCGATTTGGACTCAGGAGGATTCATCGCTGAAGCTGCTTCGCTTTTGGACTCAGCAAGAGCCATGGCTGAGGCTGCTTCGTTATCTGATTTGGGGGATAAAATCAGTAATCTTATTGCAAAGTTAGACAAAGGCCTGTTTCATGAGGAATTGTTTCACGATCTTCAGCACCATCAAGTAGGGTTACAACATCGTCTTAATGAATTCCTTGATATTTTGCGGCAGAAACACATTGCTTCAGAAGATACGAACACAGTTGGAATCTGGGGTGAAGGTGCAAGGAATGAGGATATCTTTAAAAACTTTGTCGATGTATCATATGAAGTGAAAAGGTTAGATAGCGATGAGTCCATTAAGCTTTTCAACTGGCATGCATTTAAGAGATCTACGCCAACAAATGGTTTTGAGGATCTTTCAAACAGAGTCGTTACTTTATGTGAAGGACTACCATTGCTTCTTGAAGTTATTGGCTGTCTTTTGCATAATAGGGCATTACCGGAGTGGCAAGGTGTATTGCGTGAATTGGATCAAATTTCTTATGGTCAAATGCAAAGAAAGCTCTACGTTAGCATTGAATTTCTAACCGATTTAGAGAAAGATTTGTTCTTTGCCATAGCTTGTTTTTATGTGGGTCAGAGTAAAAGCTATGTTACAGAGTTGTTAAAAGGTTCAAGACTTCCTGTGGAAGTGGTAATGCCTGTAATCTTGGAGCGTAACCTTGTAAAGATCATAAATGACAACCTTTATGTTCATGATTTGCTGCAAGAGACAGTAAGAACAAGCAGAACTGAAACTGAGTTGATTGATGAAGTCATTGAAACTATTGCAAAGAAGTTGGGTGACAACAAACGCCTATTTGTCGCACACCATCCAGTGGGATTGGAGTATCATAGCATGGCATCTGTGTATCCCATTGGCGTTATGATAAAGAATTTCACCAAACATACCATGGATTTCTACAAGCGAGATGCTGGAACCACTTTTACGGATAAAGAATGGCAGAACATAACATCTAATCTGGAGCCTGGAGATGACATGAAAGTTAAAGTTGAATTTGCACATAAATATAAATTCGCTTGTACTTATTCTAAGTACATTGTGATGGTTGTTTCTCGCAAGGCTCTGCTTAAACAACAAGTGAAGGTGAGAGCTTCCTTTCAATCATTTGATGTCTGGTCTTTGTGTGATGAGAACTCAGAAGCACTGGATCGAGTTTTCATATCTTGTCCTCAAAGCTTTGAACAGCCTTTGTCTTCATCAATTGGGTGTTGGCATAAACCATTAGCTCCTGTAGTTCCTTATTACAGCATGCCTTACAATTATCCAGAATTCAGGATAGCTTCTTCTGGAGGGTTAGCAGAGGGCAAGATAAAGTATTGA 1761 0.3998 MSHFASSSSNSGFTFEYDVFLTISHPKHHVRANLEKDLRDVGIKALIDDPIQEFLMYEIVKCRMVVVVFTPEFLESDIFLKGLVNIRRCQKLTHIKVSPVFCGLSEEQVREQLGGVDRRRLDNWNLDFDLDSGGFIAEAASLLDSARAMAEAASLSDLGDKISNLIAKLDKGLFHEELFHDLQHHQVGLQHRLNEFLDILRQKHIASEDTNTVGIWGEGARNEDIFKNFVDVSYEVKRLDSDESIKLFNWHAFKRSTPTNGFEDLSNRVVTLCEGLPLLLEVIGCLLHNRALPEWQGVLRELDQISYGQMQRKLYVSIEFLTDLEKDLFFAIACFYVGQSKSYVTELLKGSRLPVEVVMPVILERNLVKIINDNLYVHDLLQETVRTSRTETELIDEVIETIAKKLGDNKRLFVAHHPVGLEYHSMASVYPIGVMIKNFTKHTMDFYKRDAGTTFTDKEWQNITSNLEPGDDMKVKVEFAHKYKFACTYSKYIVMVVSRKALLKQQVKVRASFQSFDVWSLCDENSEALDRVFISCPQSFEQPLSSSIGCWHKPLAPVVPYYSMPYNYPEFRIASSGGLAEGKIKY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0867 586 Gene3D - 238 321 IPR042197 -
Lele38g0867 586 ProSiteProfiles TIR domain profile. 15 142 IPR000157 GO:0007165
Lele38g0867 586 Pfam TIR domain 17 116 IPR000157 GO:0007165
Lele38g0867 586 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 237 412 IPR044974 GO:0006952
Lele38g0867 586 Pfam NB-ARC domain 221 308 IPR002182 GO:0043531
Lele38g0867 586 Gene3D - 13 170 IPR035897 -
Lele38g0867 586 SMART till_3 16 146 IPR000157 GO:0007165
Lele38g0867 586 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 117 IPR035897 -
Lele38g0867 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0867 Lele-ChrLele38 20344936 20354705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0867 230 386 WRKY Transcription Factor Family AT5G45050 29.114 2.12e-13 71.6