Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0866 ATGTCCTCCATGGCTGCTTCTTCTTCTTCTCCTTCACCATCATCAAGCCTCATTAGTCCTTCATCATCATCATCATCATCAAACGAAGAACACCATTACGACGTGTTCTTGACTTACAAAACTAAATGTGAAACCATAGTTTCTCTTGAAACCTCTTTAAGGGATGCTTCAATAAGAACATACATGGACCACGATGAGCCAATCTCGTCAAACTTGAAGAAAGCCATACATCTGTCAAGAATAGTTATCTTCGTCTTCACCAAACACTTCGCTTCGTCTGAAGATTGCTTGAATAAACTCGACATAATCATGAATTGTCACAAAGATATGGGTAAGAAAGTGTTGCCTATATTGTGTGGTGTGAGTCTCTCAGATATACGTCAAGAGATTGGTAGTATTGCAGAATTAATGAGCAGAGGAGATTTGCAGAATAAACAAGATTTTTTCAGATGGAGAAGTGCCTTTACTGAAGCTACTTCGCTTTCCAGATGTACAATCTCAACCAAGTGTTCCAGATATGGCAGAAGAATCAGAGATATCACTCACTCCATTAAGATATTTCTTGATGCAACATACTTGGAAATCCCACCACATCTGGTACCAATACAGCGTCGGGTGAAAGAAGTGCTTCACTTGTCCAAATACTACTCAAATGACATAGCTGTGAGAGAAGAAAAAGTGATCGTAGTAGGCATATGTGGGGTTGTAGGCATTGGCAAATCAACCATTGCTAGAATGATTTATGATACAATCAGTGTCAATTTTGAGAGCGGAAGCTTCCTTGCAAGTATCAAGAAAATGTGGGACAAAGACAACGGTCAAGTTCTTCTCCAAGAACAACTTATTGCAGATATCACTGGCAAAATAGATTTGAAGATACGTGATACTGAAACAGGAATCAAGCAAATAAAAATAGCTCTACAGAATAGAAGAGCACTTGTAGTACTTGATGATGTTGACCAAATAGACCAACTTGTGAAATTGTGTGGAAGCAGAGAATGTTTTGGTTTTGGGAGTATGATTATCATCACTTCAAGAAGTAAACATATGTTTGACCAACATATAAAAGTCAAATATGTGTACGAGGTAAAGAAAATGGATAAAAGGGAATCTCTTGAACTTCTGAGTTGGCATGCTTTCAAGTTGAGTTGGGATGCTTTCAAGCAAACTAGTCCAAGCAATGATTTCATTAATCTTGCAAAAAATGTCATTGTTCATTGTGAAGGATTACCTCTAGTTCTTGAAGTTCTTGGCTCTCTTTTGTACAGAAAGACAACACAAGAGTGGGAATGTGTATTGAAGAAACTGAAAACCATCCCTTCAAGTCAAATTCAAGAGAAGATGAAAATAAGTTGTGAGCATTTAGATGACTCAGTTAAAGATTTATTCTTTACTATTGCATATTTTTATGTGGGTAATGAGGAATTGTCTGTTACACAAAACCTAATAAGTGGTGGTGGCTTTCAATTTCCAGTTGAGATTGGAATAAAAACACTCGTTGAACTGAGCCTGATAAAAGTTGACATGAATAATAGGGTTCATATGCATGAATTGCTTCAAGAGATTGGGAAGGGAATAAACCCTAAGAAGACAAAACCCAAGTATAACTATCATGTGTTCTTGAGTTTCTGTGGTGAAGACACACGCAGGTCTTTTGCAACTCATCTTCGTGATGCATTGAAAAGGGCTGGTCTTGAGGTTTTCATGGATCCTGAAATTAAAAGGGGAGACAATATCTCATCCTCACTAATCAAGGCAATTGAAAGTTCAAGAATATCGATCCTTATTATTTCAGTCAAATATGCAGGCTCAAGCTGGTGCTTGCAAGAACTAGAAAAGATTATGGAATGTCATAGAACTGTTGGACAACAGGTTTTCCCAATATTCTTTGGCGTGGAACCATCACATGTACGGAAGCAATCTGGTGATTTTGGAAGTGAATTCAAAAAGCTCATGAAGAGAACCACGTTTAGCAAAGAACAAAAGTTGAATTGGACAAGAACACTCAATGAAGTTGCGAATTTAGCTGGATGGGACTACTCTCATCGTGATGGAACTGAAGCTGAGTTGATTAACCATGTTATTGACACTGTCATCAAGAACCTAGATGACAACACAAATTTGTTTGTCACGCATCATCCTGTGGGGCTGAGATCTCGCATGAAGGAAATCATCCAAATGTTAAGTGACCAATCAGATGAGATTAAGGTGGTAGGAATTCTTGGGATGGGAGGGATTGGCAAAACAACCATTGCCAAATCCATTTATAATGAAGTTGGAAAAGACTTTGAGGCTAAAAGCTTCCTTGCAAACATTAAAGAAGCTTCAGAGTTAGAAAATGGCCTAGTTCATCTTCAAGAACAACTTCTTTCAAACATTTTACAAAGAGGGAAGATGACACTAAATAGTATTGAATTGGGGAAAGGTATAATGAAAGAAAGGCTTTGTGGTAAAAAGGCACTAATCGTGTTAGATAGTGTCACTAACAAAGATCAACTTGATGCTTTATGTGGGAGTCGTGAATGGTTTGGTCCAGGTAGTAGAATAATCGTTACTACTAGAGACCGAGATGTACTTCGTATCATTCAAGCAAATAATGTGTACAAGGTGAAAGAAATGGATGATAACGAGTCTTTTGAACTTTTTAGTTGGCATGCATTTAAACAAGCGACCCCAATAGAAGATTTCGTTGATGACTCAGAAAGTGTTATTGCTTATTGCCAAGGGTTGCCCTTAGCTCTTGAAGTTCTTGGTGCTTATCTCTTTGATAGGCCAAAAGAAGCTTGGAAATCTGTTTTGGATAGTCTGAAAGAAATTCCAAATCAAGAAATACATAGAAAGCTAAAACTAAGCTTTGATGGTCTAAGTAATGATTTCGAAAAAAATATATTCTTGGATATATGCTGTTTTTTCATCGGAAAGGACAGAAATTATGCTACACAAATATTAAATGGTTGTGGGCTTCATGCAGAGATTGGAATTACCCGACTCATAGAGTTGAGCCTCCTAAGAGTTGCTAAGAATAATAGACTTGATATGCATAATTTAATCCGTGACATGGGAAGAGAGATTGTTCGTAAAGAGTCACCTGAGGAACCTGGAAATCGTAGCAGAATATGGATTCGAGATAATGTGATTGATGTGTTAAGAAATTGTAGGGGAACAATCTCTGTTAAAGGACTAGCTTTGAATTTGTCAACAACAGAGACACAATCTTTTGATACGAGGGGATTTGAGCTGATGAAGAGACTTAGATTGCTTCAACTTGGCCATCATGTGAATCTTAATGGCAACTATGAATATCTATCAAAAGAGTTGAGATGGCTTTGTTGGCATGGATTTCCTTCAACTTACATGCCCCAGAATTTTTGTCAAGAAAATGCAGTTGCCATTGATTTGAGATACAGTTATCTCACCCAAGCATGGAAGAATTGTCAGTTGTTGGAGAAGTTAAAAGTTCTCAATTTAAGTCATTCTTGTGACTTGAGAGAAACTCCCAATTTTTCAAGATTGCCGAATCTTGAAAAGCTAATACTCAAAGATTGTCCACGATTGTCTTCTATTCATGAATCTATTGGAGATTTGAAGTGCTTAATATTGGCAAACTTAAAGGGTTGTAAAGATCTCAGTAACTTGCCAAAAGGTATATACAATTTGAAATCTCTAAAAACTCTCATCCTTTTTGGCTGTTCAAAACTTGAGAAATTGGAAGATGGGATCAACCAAATGGAATCCTTGGCAACTCTAATAGCAAATGAAACTGCTATAACACAAGTGCCATTTTCATTAGTGAGATCAAGAAGCATCACATATGTATCAATATGTGGCCATGAAGGATTCCCCAGAGATGTATTTCCAATTCTCGTTCAATCATGGGTGTCACCAAGAACTAATGCAAGGTCCCTTCAACATGGATTTGCAAGCATGCCGTTTTTATTGCCACATCTTTTTCGTAGTTTCAGAAGGAGACCTTATAATACATTCCATATTCCTGTGGTAACAAATCTAGCTTCAATTGGTTTTCATGATGATGACCAAGTACACACTGCAAAGGCTGCAAATTTCTCGAGTTCCCTTACTATACAAGTGGGAGGATTTAGCCAAGTCATTGATACACTTTTGAAGAGTATCTGTCAGGTTTCCGAAAAGCAGCCCAGCGAGCAACCTTGTTTTATTTTAAGACGAAACAAATGGAACAGGACGAATGGTGTTGGAGACTTCTTCAACTTTTTTGACAAATCTCCATCTCAAAAGCTGGATGTGTTCTCTTCTTCTGATGAACTTGATTTTCTTGTTGGCTAG 4302 0.3747 MSSMAASSSSPSPSSSLISPSSSSSSSNEEHHYDVFLTYKTKCETIVSLETSLRDASIRTYMDHDEPISSNLKKAIHLSRIVIFVFTKHFASSEDCLNKLDIIMNCHKDMGKKVLPILCGVSLSDIRQEIGSIAELMSRGDLQNKQDFFRWRSAFTEATSLSRCTISTKCSRYGRRIRDITHSIKIFLDATYLEIPPHLVPIQRRVKEVLHLSKYYSNDIAVREEKVIVVGICGVVGIGKSTIARMIYDTISVNFESGSFLASIKKMWDKDNGQVLLQEQLIADITGKIDLKIRDTETGIKQIKIALQNRRALVVLDDVDQIDQLVKLCGSRECFGFGSMIIITSRSKHMFDQHIKVKYVYEVKKMDKRESLELLSWHAFKLSWDAFKQTSPSNDFINLAKNVIVHCEGLPLVLEVLGSLLYRKTTQEWECVLKKLKTIPSSQIQEKMKISCEHLDDSVKDLFFTIAYFYVGNEELSVTQNLISGGGFQFPVEIGIKTLVELSLIKVDMNNRVHMHELLQEIGKGINPKKTKPKYNYHVFLSFCGEDTRRSFATHLRDALKRAGLEVFMDPEIKRGDNISSSLIKAIESSRISILIISVKYAGSSWCLQELEKIMECHRTVGQQVFPIFFGVEPSHVRKQSGDFGSEFKKLMKRTTFSKEQKLNWTRTLNEVANLAGWDYSHRDGTEAELINHVIDTVIKNLDDNTNLFVTHHPVGLRSRMKEIIQMLSDQSDEIKVVGILGMGGIGKTTIAKSIYNEVGKDFEAKSFLANIKEASELENGLVHLQEQLLSNILQRGKMTLNSIELGKGIMKERLCGKKALIVLDSVTNKDQLDALCGSREWFGPGSRIIVTTRDRDVLRIIQANNVYKVKEMDDNESFELFSWHAFKQATPIEDFVDDSESVIAYCQGLPLALEVLGAYLFDRPKEAWKSVLDSLKEIPNQEIHRKLKLSFDGLSNDFEKNIFLDICCFFIGKDRNYATQILNGCGLHAEIGITRLIELSLLRVAKNNRLDMHNLIRDMGREIVRKESPEEPGNRSRIWIRDNVIDVLRNCRGTISVKGLALNLSTTETQSFDTRGFELMKRLRLLQLGHHVNLNGNYEYLSKELRWLCWHGFPSTYMPQNFCQENAVAIDLRYSYLTQAWKNCQLLEKLKVLNLSHSCDLRETPNFSRLPNLEKLILKDCPRLSSIHESIGDLKCLILANLKGCKDLSNLPKGIYNLKSLKTLILFGCSKLEKLEDGINQMESLATLIANETAITQVPFSLVRSRSITYVSICGHEGFPRDVFPILVQSWVSPRTNARSLQHGFASMPFLLPHLFRSFRRRPYNTFHIPVVTNLASIGFHDDDQVHTAKAANFSSSLTIQVGGFSQVIDTLLKSICQVSEKQPSEQPCFILRRNKWNRTNGVGDFFNFFDKSPSQKLDVFSSSDELDFLVG 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0866 1433 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 537 1250 IPR044974 GO:0006952
Lele38g0866 1433 Gene3D - 26 192 IPR035897 -
Lele38g0866 1433 Gene3D - 531 704 IPR035897 -
Lele38g0866 1433 Gene3D Ribonuclease Inhibitor 1047 1276 IPR032675 -
Lele38g0866 1433 FunFam Disease resistance protein (TIR-NBS-LRR class) 533 704 - -
Lele38g0866 1433 MobiDBLite consensus disorder prediction 1 28 - -
Lele38g0866 1433 Gene3D - 872 956 IPR042197 -
Lele38g0866 1433 Gene3D - 365 456 IPR042197 -
Lele38g0866 1433 PRINTS Disease resistance protein signature 1217 1233 - -
Lele38g0866 1433 PRINTS Disease resistance protein signature 814 828 - -
Lele38g0866 1433 PRINTS Disease resistance protein signature 737 752 - -
Lele38g0866 1433 PRINTS Disease resistance protein signature 907 921 - -
Lele38g0866 1433 SMART AAA_5 226 362 IPR003593 -
Lele38g0866 1433 SMART AAA_5 734 877 IPR003593 -
Lele38g0866 1433 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 158 IPR035897 -
Lele38g0866 1433 SUPERFAMILY L domain-like 1013 1276 - -
Lele38g0866 1433 SMART till_3 32 161 IPR000157 GO:0007165
Lele38g0866 1433 SMART till_3 536 675 IPR000157 GO:0007165
Lele38g0866 1433 Gene3D - 705 869 IPR027417 -
Lele38g0866 1433 Gene3D - 193 360 IPR027417 -
Lele38g0866 1433 ProSiteProfiles TIR domain profile. 535 702 IPR000157 GO:0007165
Lele38g0866 1433 SUPERFAMILY Toll/Interleukin receptor TIR domain 532 678 IPR035897 -
Lele38g0866 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 464 IPR027417 -
Lele38g0866 1433 Pfam TIR domain 33 184 IPR000157 GO:0007165
Lele38g0866 1433 Pfam TIR domain 536 702 IPR000157 GO:0007165
Lele38g0866 1433 Pfam NB-ARC domain 224 451 IPR002182 GO:0043531
Lele38g0866 1433 Pfam NB-ARC domain 720 941 IPR002182 GO:0043531
Lele38g0866 1433 ProSiteProfiles TIR domain profile. 31 195 IPR000157 GO:0007165
Lele38g0866 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 967 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0866 Lele-ChrLele38 20329408 20339623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0866 33 526 WRKY Transcription Factor Family AT4G12020 27.291 5.82e-29 124