Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0864 ATGGAAGAAGAGAAATTAGTCGCACTTGATGCTATTATGAAGGAAGCTGTTGATCTGGAGAATATTCCTATTGAGGAAGTGTATCAACATCTCAAATGCACGAAGGAAGGTTTGAGCTCTGAAGAAGTAAATCAGAGGCTTGGCTTGTTTGGATACAACAAGCTAGAAGAGAAGAAAGAAAGTAAAATACTGAAATTTTTGGGATTCATGTGGAATCCATTGTCTTGGGTGATGGAAGCTGCTGCTATTATGGCCATTGCTATGGCCCATGGAGGGGGCAAGCCTGGAGATTATCAAGATTTTGGTGGCATAGTCATGTTGCTTCTCATAAATTCTACCATAAGCTTCATGGAAGAAAACAATGCTGGAAATGCTGCTGCTGCGCTTATGGCTCGTTTGGCCCCAAAAGCTAAGGTACTGCGTGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCTGGAGACATAATTAGTATCAAGCTTGGTGACATCATTCCTGCAGATGCTCGTCTCCTTCAAGGAGATCCTTTAAAGATTGACCAATCTGCTCTGACTGGAGAATCACTTCCAGTGACAAAAAATCCTGGAGATGGAGTATATTCTGGCTCAACTTGCAAGCAAGGAGAAATAGAAGCTCTAGTTATAGCCACCGGGGTCCACACTTTCTTTGGCAAAGCAGCTCATCTTGTGGAAAATACCACACATATAGGACACTTCCAGAAGGTTTTGACATCCATTGGGAACTTCTGCATTTGTTCGATCGCGGTTGGGATGCTTATCGAAATGATTGTGATATGGGGGGCTGACAAGAGAAGTTACCGAACCGGAATCGATAACCTCCTCGTGCTACTCATTGGTGGGATCCCAATTGCAATGCCAACTGTTCTTTCTGTCACAATGGCTATTGGTGCACACAAATTATCTCAGCAGGGTGCCATAACAAAGAGGATGACTGCCATTGAAGAAATGGCTGGCATGGATGTGCTATGCAGTGACAAAACAGGCACACTAACTCTTAATAAGCTCTCTGTGGACAAGAATTTGATTGAGGTTTTTCCCAAAGAAGTTGACAAGGATATGGTTGTACTTATGGCTGCAAGAGCATCAAGAACAGAGAATCAAGATGCGATTGATGGTGCAATTGTTGCCATGTTATCTGATCCAAAAGAGGCAAGAGCTGGTATAACAGAAGTTCATTTTCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACATATATTGATGATGATGGTGAGATGTACAGAGTTAGTAAAGGTGCACCAGAACAGATTCTCAATCTTTCACATAACAGATCCGAAATTGCACAGAGGCTTCATACCATTATTGACAAGTTCGCAGAACGTGGACTACGGTCTCTTGCGGTAGCCCGGCAGGATGTACCTGAAGGAACTAAAGAAAGTGCAGGAGGCCCCTGGGAATTTGTTGGCCTTCTTCCACTTTTCGATCCTCCTCGCCATGATAGCGGAGAAACAATCAAAAGAGCTCTGGATCTTGGAGTGAGTGTCAAAATGATAACAGGAGATCAACTTGCAATTGCTAAGGAAACAGGAAGGCGTCTAGGAATGGGTACTAACATGTATCCTTCTTCATCTCTTCTTGGTGAACACAAAGGTGAAACACTTGAGTCTCTCCCAATTGATGAGCTCATTGAGAATGCTGACGGATTTGCTGGTGTCTTTCCTGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGGATGACTGGTGATGGTGTAAATGACGCTCCCGCCTTGAAGATAGCTGACATAGGTATAGCTGTAGCAGATGCCACCGATGCTGCTCGAAGCGCATCTGACATAGTTCTAACAGAACCTGGATTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCTATCTTCCAAAGGATGAAAAACTACACGATATATGCTGTATCTATCACTATACGTATTGTGCTGGGCTTTATGTTATTGACCTGCTTTTGGAAATTTGACTTCCCTCCCTTTATGGTTCTTATAATAGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCTTCTCCAGCACCTGATAGTTGGAAGCTCAGTGAAATTTTTGCAACTGGGATTGTCCTTGGAAGCTATCTGGCTATAATGACTGTGATATTCTTCTGGGCAGCTTATGAAACTGACTTTTTCCATAACCATTTTCATGTGGAGAACTTCAATTCAAACCTCTACGACATGGCAAATAAAGATATCGCCAAGGCACTGAATGAGAAGATGGGATCTGCAGTGTATCTTCAAGTCAGCATCATCAGTCAAGCTTTAATCTTTGTAACTCGCTCTCACGGATGGTCCTACACCGAACGACCTGGTCTTTTGCTCGTTATTGCTTTCATTATTGCTCAGCTGGTTGCAACAGTTTTATCTGCCACTGTGTCCTGGCATACTGCTGGAATAAAAAAAATAGGTTGGAAGTGGGCAGGAGTCATTTGGCTATACAACATTGTAACCTATGTATTGTTGGATCCTATAAAATTTGCTGTCCGTTATGCATTAAGTGGAAGGGCTTGGAATTTGGTCGTAAATCAAAGAACTGCATTCACAAACAAAAATGACTTTGGAAGAGAAGCTCGTGAGGCTGCATGGGCTGCTGAGCAAAGAACCCTTCATGGCCTTCAGTCTGCTACTGATTCAAAGATATTTGCAGAGAAGCACACATTCAGGGAAATCAACACACTAGCAGAAGAGGCCAAGAGAAGAGCTGAAATAGCAAGGATGAGAGAGCTTCACACTTTGAAAGGAAAAGTGGAATCATTTGCTAAGTTAAGGGGTTTGGACGTTGACAATATTAACGGGCACTACACTGTCTAA 2904 0.4253 MEEEKLVALDAIMKEAVDLENIPIEEVYQHLKCTKEGLSSEEVNQRLGLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGKPGDYQDFGGIVMLLLINSTISFMEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLQGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEALVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMLIEMIVIWGADKRSYRTGIDNLLVLLIGGIPIAMPTVLSVTMAIGAHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFPKEVDKDMVVLMAARASRTENQDAIDGAIVAMLSDPKEARAGITEVHFLPFNPTDKRTALTYIDDDGEMYRVSKGAPEQILNLSHNRSEIAQRLHTIIDKFAERGLRSLAVARQDVPEGTKESAGGPWEFVGLLPLFDPPRHDSGETIKRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGEHKGETLESLPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPAPDSWKLSEIFATGIVLGSYLAIMTVIFFWAAYETDFFHNHFHVENFNSNLYDMANKDIAKALNEKMGSAVYLQVSIISQALIFVTRSHGWSYTERPGLLLVIAFIIAQLVATVLSATVSWHTAGIKKIGWKWAGVIWLYNIVTYVLLDPIKFAVRYALSGRAWNLVVNQRTAFTNKNDFGREAREAAWAAEQRTLHGLQSATDSKIFAEKHTFREINTLAEEAKRRAEIARMRELHTLKGKVESFAKLRGLDVDNINGHYTV 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0864 967 SUPERFAMILY HAD-like 328 638 IPR036412 -
Lele38g0864 967 SFLD p-type atpase 314 642 IPR044492 -
Lele38g0864 967 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Lele38g0864 967 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 351 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 566 671 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 Pfam E1-E2 ATPase 133 311 - -
Lele38g0864 967 Gene3D - 135 219 - -
Lele38g0864 967 Gene3D - 97 830 - -
Lele38g0864 967 Gene3D - 344 491 IPR023299 GO:0000166
Lele38g0864 967 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 821 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele38g0864 967 PANTHER CALCIUM-TRANSPORTING ATPASE 20 899 - -
Lele38g0864 967 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
Lele38g0864 967 Gene3D - 916 967 - -
Lele38g0864 967 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Lele38g0864 967 Gene3D - 329 628 IPR023214 -
Lele38g0864 967 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Lele38g0864 967 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Lele38g0864 967 FunFam ATPase 4 plasma membrane-type 575 831 - -
Lele38g0864 967 FunFam Plasma membrane ATPase 484 639 - -
Lele38g0864 967 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Lele38g0864 967 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Lele38g0864 967 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Lele38g0864 967 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Lele38g0864 967 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Lele38g0864 967 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Lele38g0864 967 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 863 IPR023298 -
Lele38g0864 967 CDD P-type_ATPase_H 37 857 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele38g0864 967 FunFam Plasma membrane ATPase 344 491 - -
Lele38g0864 967 SFLD Haloacid Dehalogenase 314 642 - -
Lele38g0864 967 PRINTS H+-transporting ATPase (proton pump) signature 776 797 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele38g0864 967 FunFam Plasma membrane ATPase 135 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0864 Lele-ChrLele38 20309623 20318478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0864 8 967 Primary Pumps ATPases AT3G60330 78.564 0.0 1543