Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0815 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGACAATCAGTACCGTAAATCCGGCCGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACATACGTTAAGGGCGGTGGCGGCGGGCCCGCGCCTTCTCCCGGGATCACTTCGGGTTCCTTACAGTCCTCTAATCGGAGTTTTAAGAGGTCTAATAATCCACATGGCGGGCAATCTAGGGTAAACCCTCCCCCTGTGTATTCAGCTGAGTCTTATGGTGCTTCTTCAGGCCGGACGATACCAAATGGTGCCCATATACAACAATCACCAGGAGCATCTGATGCGCCACATACAAATGCAACTGCCAAGTCATCTGAACCCGCATCTGTACAGAAGAGCACCAGAGTTGTTCCAAAAGCTCCAACACCTCGACCCCCCACCATGAATTCTGATACAGCAGCTCCTACAACTCCTGCCAAGGCTCCTGAAGATTCATCCAAGCCATTTGCTTTCCAATTTGGGTCCATTAATCCCGGTTTCATGAATGATATTTCCATTCCTGCTCGTACAAGCTCAGCTCCTCCAAATTTGGATGAGCAGAAAAGAGATCAGGCTCGTCATGAATCTTTTAGACCTGTGCCTTCAGTGCCTATACCTCCAAAGCAGCTACCACCAAGGAATGATGGTGGTGTTACTGACCAATCTAATGCCGGGAAGGCTCATCCAGTAAGCAAGGTGAAAAAGGAGGAGCAGGCGTCCGATTTGCCCCCAGCAAGCCAGGTTCAAAAGCCATCTGTTGCCATGACTGGGATTTCAATGGCAATGCCATATCTTCACCAATCACAGGCACCTGTACAGTTTGGTGGTCCTAACCCACAGATTCAATCTCAGGGAATGCCAGCAGCATCGCTTCAGATGCCTATGCCAATGCCTTTACCAATGGGAAATGTTCCACAAGTACAACAGCAGGTTTTTGTTCCAGGTCTTCAACCTGTTCCTATTCATCCTCAGGGAATTATGCATCAAGGCCAAAACTTGAGTTTCACTCCTCAAATGGGTCCTCAGATGCCCCATCAGTTAGGTAACATGGGTATTAACATGAACCCACAATATTCCCAGCAGCAAGGTGGAAAATTTGCTGGTCCTCGCAAAACTAATCCTGTCAGGATTACTCATCCTGAGACACATGAAGAGCTGAGGCTTGACTTTGACAAAAAGGCAGATTCACATTCAGATGGCATGGCCTCAGGTGCTAGGTCTTATCCTAATGTTCCTTCTCAGTCTCAACCTGTTCAATCATTTGCTGCTTCTCATACTCTCAACTATTTTCCATCTAGCACTTACAGTAGCAGCTCTCTTTTTTTCCCACCTAGTTCTTTTCCTTTAACAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGATTTAGCTATCCAGTTAACCAGGGCCACCAAAATGCAGGTTTTAACAATCAATTATCTATTGGTTCCTTGCCTGTTAATAAAAATGGCACTTCTGTTCCTAGCCTTGGTGAAGTACCAAATGTGGAACATTCTCGTGATGTGCAGAAGGTGATATCATCAGGTACATCTGGAGTAACCCATGCTAATATCAAACCAAGTGGCGGCTCTGGTATCATGGACTCGACAATCACCAATTCCGGCATTTCTGTTAAAACAAGTGAATCTCCCAGCTATTTGGGGTCATCTGTTGATGTTGGCTCCACTGTGTGTCATCATAAAGGATCTGATAATTTTTCTGAGACCTCTGCACAGCCATCTAACTCATCCAGTGATTCTTTTTTTTCAAGGTCAGTGCCAAAACAACCGGCTGCAGTAACTACTGAGAAGCTTGCATCTACTCCCTTGATACCTTCTGTCTCAGTTGTGTCCAACGATGAAGGCAGAAGGAAGGAATCTCTGAGCAGGTCAAACTCTTTGAAAGATAATCACAAGAAAACAGGGAAGAGAGGCCAAGCACAGCATCAGGTTCCTGTACAATCTCCTGCAGTGGTTAATGTACCTTCTCAAGCTATTGATAGTGTTATGCTTGATTGTGGAGTTTCTGATACTGTAGAGAACAAAACAAAGGCTTGTGTAGCAATAACAAGCGAAGGTTGCTCTAGCACACTAGAGGCTTTATCCACTGCAGTTAGCAGTGATATTGTTCCTAATTCCTATAAAATAAACATTGAACCGTCTGTGGAAGGTTCTGTCTGCATTTCAGCTGAAGGAATTGGTGCTTTAGCTGTTGGTAGTTTGGGCAACCCTGAGCATGATAAACTAGAGAAATCATCACAACAGGATAAGCTTCCAAAGATGAATATACTTGAGGTGGGTGATAAAAATGAAAAATCTTCTGAAATATTTCAACAAAAAAGTGATGACATTGCAGCTAAGTTTAAACAAACAGAACAAGATGCGTCTAAGGAATTGCAAGATGTACCACAAAGACTGGAATTGCAGGATGAATCTACAAATTTTAGATCAGAATGCGACAGGAAGGATGATAATTTAGGTGTGCCTGCCTCAAATGATTTGGATTCTAGAGATATTTCTTTAAATAGAAATGATAGTACAGTTAGTAATGAATCTATTTCTGCAAATTCTGCTGCATCTGATAAGAATTCAGGTGATCTCTCAGAAACCACTTCAAAACATCGCAAGGATTGTCCGGAGATTGCAGAGAGTGGCTCAGTATCCCTACCAACATCAGTTAACAAAGATAGACCTATTCTGGAGCCAAATAAGGTGAAAACTACAACCAAAGAAAAGCCGAAAAGAAAGGATATTCTTAAAAAAGCAGATGCTGCTGGGTCAATTTCTGATCTTTATAATGCGTACAAGGGACCTGAGGAAAAGAAAGAAATTGTTGCAAGTACAGAGAGCAAAGAAAGTACTTCATCTGGAAGTTTAAAGCAGTTGCCTAAAGAGGCTGCTCAATCAGATGCCATTGCAACTGAGAAAGATGGACATGATAAAGCTGAGCCTGATGATTGGGAGGATGCTGCTGACATGTCTTCCCCAAAATTGGAAGTGGTGGATAAAACTCAACAGGTCAGTGATGGAAGTGAACTTACAGCGAAAAAATACTCTAGAGATTTCCTCTTAAAATTTGAAGACCAATGTGTTGATCTTCCTGAGGGTTTTGAAATTACAGAAGACATTGCTCAGGCTTTGATGAATTCTAATATTTCTGGTTCCCATGTTGAACGGGATTCACATCTTAGTCCAGGAAGAATTATGGACAGGTCTGGTGGGATGTCTCGAATGGATCGACGTGGGTCTGGTCATTTTGAAGATGACCGGTGGAGTAAAGTTCCTGGACCCATGCGGATGGATGGTTTTGGAGGTAATCCAGGATTTCGACATGGTCAAGGAGGCAATTTTGGTGTTCAGAGGAACCCACGTGGTCAGACGCCTCTGCAATATGCTGGAGGGATCCTTTCTGGACCAATGCAATCATTGGGAAATCAGGGAGGTATGCAAAAAAATAGCCCTGATGGTGAGAGGTGGCAACGAGTGACTAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACCCCACTGCAGGCGATGCATAAAGCTGAGAAGAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAAGTGAAACAGAGGCAGTTGAAAGCCATTTTGAACAAGTTAACTCCCCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATACTGTCACTCTTAATGGTGTAATCTCTCAAATATTTGAGAAAGCTCTAATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGCTTACATCTAGCTGATGAGTTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTGTTAAACAAGTGCCAAGAGGAATTTGAAAGAGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGATGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGAGAAACGAGTTAAGGCAAGAAGACGCATGTTAGGTAATATACGGTTGATTGGAGAGTTATATAAGAAAAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGATCCTATCAAGACCCTGATGAGGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGACGCTTATTTTGGAAGGATGAAATTGTTATCAAACAACATGAATTTATCTTCTCGAGTGAGATTCATGTTGAGGGATGCTATTGATCTGAGAAAGAATAAATGGCAGCAAAAGCGGAAAGTTGAAGGTCCAAAGAAAATTGAGGAGGTACACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAGGACGTGGTCCAGGCAATGCTGCATCTTCAAAAAGGATGCCTATGGATTTTAGTCCAAGAGGGTCATCTTTGTTGTCTGCTCCTAACACCCCAATTGGGCTGCGTGGGCTTTCTGCACAAGTTCGTAGTGGCGGTTCTCAGGATTTTCGTCAAGATGATAGACTATCATATGAGGCTAGAAATTTGTCTGTTCCTTTTCCTCAGAGACCTTTAGGTGATGATTCTATAACCTTGGGACCGCAAGGTGGTCTTGCAAGAGGGATGTCCTCTAGAGGGCCAGCTGTAATTCCAAGTTCTCCTGTTCCTGATGCGATCCCAGGTGCAGATTCTCGAAGAATGATGTCTGGCCTTAATGGTTATAGTAATTCATCAGAGTTTGCTTTGTACAGCAGTAGAGATCAAATGCCAAGATATGCTACTGATAGATTTCCTGGTCCGACTGCACATGACCAATCAGCTGTTCAGGAGCGTAATATTGATTATGGTAATAGGGAGTTGAGAAATGCAGAACGGAGTCTTGAGAGACCTTTTGCAACTTCAGCTGCTAGAGTGCAAAGATCTGCAGTCTCTGATAATGCTTCTTCTGAGAACGTTTGTCCAGAAGAAAAACTGCGGGACATTTCCATGGCAGCAATTAAAGAATACTACAGCGCTAGAGATGTAAAAGAAGTTGCATTGTGTGTCAAAGATCTAAACTCTCCAAGCTATCATCCTTCGATGATTTCTCTATGGGTCACAGACTCCTTTGAGAGAAAGGATATGGAAAGAGATCTTTTGGCCAAATTACTAGTGAGCCTTGCAAAGGATGTCACCTTGAGTCAGTCTCAGCTTATCGAAGGGTTTGAATCTGTTCTGAGTGGTCTGGAAGATGCCGTTAATGATGCCCCGAGAGCACCGGAATTTCTAGGCCAAATTTTTGCCAGAGTCGTGACAGAAAATGTTGTCTCTTTGAAAGATATCGGTCAGCTATTACAAGAAGGTGGAGAGGAGCCAGGTCAACTCTTAAAAATTGGACTTGCAGCTGATGTTCTGGGAAGCACCTTGGAGGAAGTAAACATGGAGAAAGGGGATACTTCTCTGAGTGAGATATGCTCAAACTCCAACTTGAGGCTGGACGCTTTCCGGCCACCTAATGCCATTGTATCAAGAAAGTTAGAAAAATTTATTTAG 5547 0.4323 MSFNQSRSDKSDNQYRKSGRSGSFNQQRGSSGTYVKGGGGGPAPSPGITSGSLQSSNRSFKRSNNPHGGQSRVNPPPVYSAESYGASSGRTIPNGAHIQQSPGASDAPHTNATAKSSEPASVQKSTRVVPKAPTPRPPTMNSDTAAPTTPAKAPEDSSKPFAFQFGSINPGFMNDISIPARTSSAPPNLDEQKRDQARHESFRPVPSVPIPPKQLPPRNDGGVTDQSNAGKAHPVSKVKKEEQASDLPPASQVQKPSVAMTGISMAMPYLHQSQAPVQFGGPNPQIQSQGMPAASLQMPMPMPLPMGNVPQVQQQVFVPGLQPVPIHPQGIMHQGQNLSFTPQMGPQMPHQLGNMGINMNPQYSQQQGGKFAGPRKTNPVRITHPETHEELRLDFDKKADSHSDGMASGARSYPNVPSQSQPVQSFAASHTLNYFPSSTYSSSSLFFPPSSFPLTSSHITPNSQQPRFSYPVNQGHQNAGFNNQLSIGSLPVNKNGTSVPSLGEVPNVEHSRDVQKVISSGTSGVTHANIKPSGGSGIMDSTITNSGISVKTSESPSYLGSSVDVGSTVCHHKGSDNFSETSAQPSNSSSDSFFSRSVPKQPAAVTTEKLASTPLIPSVSVVSNDEGRRKESLSRSNSLKDNHKKTGKRGQAQHQVPVQSPAVVNVPSQAIDSVMLDCGVSDTVENKTKACVAITSEGCSSTLEALSTAVSSDIVPNSYKINIEPSVEGSVCISAEGIGALAVGSLGNPEHDKLEKSSQQDKLPKMNILEVGDKNEKSSEIFQQKSDDIAAKFKQTEQDASKELQDVPQRLELQDESTNFRSECDRKDDNLGVPASNDLDSRDISLNRNDSTVSNESISANSAASDKNSGDLSETTSKHRKDCPEIAESGSVSLPTSVNKDRPILEPNKVKTTTKEKPKRKDILKKADAAGSISDLYNAYKGPEEKKEIVASTESKESTSSGSLKQLPKEAAQSDAIATEKDGHDKAEPDDWEDAADMSSPKLEVVDKTQQVSDGSELTAKKYSRDFLLKFEDQCVDLPEGFEITEDIAQALMNSNISGSHVERDSHLSPGRIMDRSGGMSRMDRRGSGHFEDDRWSKVPGPMRMDGFGGNPGFRHGQGGNFGVQRNPRGQTPLQYAGGILSGPMQSLGNQGGMQKNSPDGERWQRVTNFQQRGLIPSPQTPLQAMHKAEKKYEVGKVTDEEQVKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNTVTLNGVISQIFEKALMEPTFCEMYANFCLHLADELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKDDEGEVKQSDEEREEKRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGSYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFGRMKLLSNNMNLSSRVRFMLRDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQAQTGRLGRGPGNAASSKRMPMDFSPRGSSLLSAPNTPIGLRGLSAQVRSGGSQDFRQDDRLSYEARNLSVPFPQRPLGDDSITLGPQGGLARGMSSRGPAVIPSSPVPDAIPGADSRRMMSGLNGYSNSSEFALYSSRDQMPRYATDRFPGPTAHDQSAVQERNIDYGNRELRNAERSLERPFATSAARVQRSAVSDNASSENVCPEEKLRDISMAAIKEYYSARDVKEVALCVKDLNSPSYHPSMISLWVTDSFERKDMERDLLAKLLVSLAKDVTLSQSQLIEGFESVLSGLEDAVNDAPRAPEFLGQIFARVVTENVVSLKDIGQLLQEGGEEPGQLLKIGLAADVLGSTLEEVNMEKGDTSLSEICSNSNLRLDAFRPPNAIVSRKLEKFI 1848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0815 1848 Pfam MA3 domain 1669 1773 IPR003891 -
Lele38g0815 1848 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 355 1847 IPR045208 GO:0003743
Lele38g0815 1848 MobiDBLite consensus disorder prediction 399 421 - -
Lele38g0815 1848 Coils Coil 1288 1308 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 872 886 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 576 596 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1 256 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 904 928 - -
Lele38g0815 1848 SUPERFAMILY ARM repeat 1658 1845 IPR016024 -
Lele38g0815 1848 ProSiteProfiles MI domain profile. 1662 1784 IPR003891 -
Lele38g0815 1848 SMART if4_15 1206 1428 IPR003890 GO:0003723|GO:0005515
Lele38g0815 1848 Gene3D - 1657 1848 - -
Lele38g0815 1848 Gene3D - 1206 1441 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1432 1452 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1432 1481 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1078 1100 - -
Lele38g0815 1848 SUPERFAMILY ARM repeat 1200 1430 IPR016024 -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 954 968 - -
Lele38g0815 1848 Pfam MIF4G domain 1206 1428 IPR003890 GO:0003723|GO:0005515
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1060 1102 - -
Lele38g0815 1848 FunFam Eukaryotic translation initiation factor 4G 1656 1847 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1297 1325 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 176 190 - -
Lele38g0815 1848 SMART ma3_7 1663 1775 IPR003891 -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 796 1016 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 840 871 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 621 659 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 975 1001 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 796 833 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 17 33 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 84 128 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 47 71 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 1543 1562 - -
Lele38g0815 1848 MobiDBLite consensus disorder prediction 624 648 - -
Lele38g0815 1848 FunFam Eukaryotic translation initiation factor 4G 1206 1441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0815 Lele-ChrLele38 19861458 19869543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0815 1 1847 Eukaryotic Initiation Factors Gene Family AT3G60240 44.404 0.0 1254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0815 38 19861458 19869543 Lele38g0815 38 19861458 19869543 ECH
Lele38g0815 38 19861458 19869543 Lele39g0528 39 4568026 4576897 hybridization
Lele38g0815 38 19861458 19869543 Lele40g0760 40 17866642 17868126 hybridization