Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0792 ATGGAGTTTCACAAACTCGAAATCCCCAAAACTAACAGTGACCAAGTCGTCATCAACATGGAACTGCAGCAACAACAACCAAACCCTAAACAAGATTACTCTCCTCAATCCTATATTAATCATCCAGGAAACAGAACACTCCAACGCCTCAAGTTTTCCAAACCAAGATCACGTTTTGAGGAGATAAACTACCCTATCTCAACACCCAAACGAACCTACAATCCCATCCCTGAATCAGATGATCATAGCCAGCCCTTGAGTTCGCAAACAGAAAACCCTACTAATTACTCTTCCACCGAAGAAGACGACGACGAATGGTTCGAAAACGGAGACGAGCACGGCTACGATGACGCCGACGACGCCACCGGAAAGTGCAGAAAGAGGAAGAAGAAAATCAACAAGAGGGCTTTACTGGAATGGACTTTGTTCCTCATCATCGTGACTTGTCTGGTATGTTCTCTCACTATTAAATCCCTAGAGCACAAGACTCAGTGGAGCTTAGAAATCTGGAAATGGTGCTTGCTGGTGATGGTAATCTTCTGCGGCCGTCTCGTCTCCGAATGGGTAGTCCGAATCCTGGTGTTTCTCATTGAACGCAACTTCATGTTGAGAGAGAAAGTTCTCTACTTCGTTTACGGTCTTCGAAAGAGTTTTCAGAACTGTGTGTGGCTTGCCCTAGTTTTGATCGCATGGATGATTATGTTCCACGACGCTCATAACAAAAACAAAGTCCTCAAGAAGTTCTTTAGGGCTCTCGTCGCCATCCTCGTCGGCGCCACCATATGGTTACTAAAAATAGTATTCGTTAAGGTTCTTGCGTCGTCGTTCCACGTCGCGGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTATGTCTTGGAGGCACTCTCCGGGCCGCCGTTGGATGAGGAGGAGATGGACCTGCCGCGGCGGCATTTGCAGGCGTCAAAGTCGTTGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCCGTTGAAGTCACGGTCGAGGAAGGGGGATGGGTCGAGGAGTATTGACATAGAGAAGCTCAAGAGGCTGAGCATGGACGGGAGAGCGACGGCGTGGAGTGTGAAGAGGTTGGTGAGTTACGTGATGTCGTCGGGATTGTCGACGATTTCGAGGACGGTGGACGATTTTGCCAACGCCGAGTCGGAGATTAATAGCGAGTGGCAGGCTAGGACTTGTGCTCAGAGGATATTCAAGAATGTCGCAAAGGATGGGGCCAAGTACATAGAAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTTTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATCACCAAGTCCTCTTTTCGAAATTGGGTGCTACATGCGTACGTAGAGAGAAAAGCATTGGCACATTCATTGAACGATACGAAAACTGCAGTTCGGCAACTACACAAACTGGCAAGTGCAATTGTAATAGTGATCATAACTGTGGTTTCTCTCTTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTCGTCGTCACTTCTCAACTCTTGCTCGTAGGCTTTGTGTTCCAAAATATGTGCAAAACTGTCTTCGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTTGATGTCGGAGATCGCTGTGTCATTGATGGTATTCAGATGATTGTGGAAGAGATGAATATATTGACAACAGTGTTCTTGAGATATGACGGTGAAAAAATTTATTATCCGAATCCAGTTCTGCTGACGAAACCTATAAGCAATTTCAGAAGAAGCCCTGATATGGCTGACGCTGTGGACTTCACTATTGACGCCTCTACCTCTACCGACAATCTCTGTGCCCTCAAGAAGGCCATCCAAGCGTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACACGTAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTGCGTTCAACATACCATTAACCACCAAAACTTTGGCGAGCGGAACGCCCGGCGATCGGAGCTTTTGCTCGAGCTAAAGAGGATCTTTGAGAGCCTTGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACACAGGTTAACTTTGGCAACAACAATAATGGAGCCTTCCCACTTTCATCTTCATAA 2154 0.461 MEFHKLEIPKTNSDQVVINMELQQQQPNPKQDYSPQSYINHPGNRTLQRLKFSKPRSRFEEINYPISTPKRTYNPIPESDDHSQPLSSQTENPTNYSSTEEDDDEWFENGDEHGYDDADDATGKCRKRKKKINKRALLEWTLFLIIVTCLVCSLTIKSLEHKTQWSLEIWKWCLLVMVIFCGRLVSEWVVRILVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHNKNKVLKKFFRALVAILVGATIWLLKIVFVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEEEMDLPRRHLQASKSLPARLRYEKSQPLKSRSRKGDGSRSIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFANAESEINSEWQARTCAQRIFKNVAKDGAKYIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVLHAYVERKALAHSLNDTKTAVRQLHKLASAIVIVIITVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIDGIQMIVEEMNILTTVFLRYDGEKIYYPNPVLLTKPISNFRRSPDMADAVDFTIDASTSTDNLCALKKAIQAYIESKPKYWNPKHVVIVKEIENMDKMKMALCVQHTINHQNFGERNARRSELLLELKRIFESLGIKYRLLPQEVHLTQVNFGNNNNGAFPLSSS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0792 717 MobiDBLite consensus disorder prediction 67 96 - -
Lele38g0792 717 SUPERFAMILY Sm-like ribonucleoproteins 533 592 IPR010920 -
Lele38g0792 717 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 37 703 IPR016688 -
Lele38g0792 717 Gene3D - 543 592 IPR023408 -
Lele38g0792 717 MobiDBLite consensus disorder prediction 23 122 - -
Lele38g0792 717 PIRSF Memb_At2g17000 9 713 IPR016688 -
Lele38g0792 717 Pfam Mechanosensitive ion channel 484 689 IPR006685 GO:0016020|GO:0055085
Lele38g0792 717 MobiDBLite consensus disorder prediction 23 47 - -
Lele38g0792 717 MobiDBLite consensus disorder prediction 97 115 - -
Lele38g0792 717 FunFam Predicted mechanosensitive ion channel 543 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0792 Lele-ChrLele38 19552144 19567971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0792 27 703 Mechanosensitive Ion Channel Family AT5G12080 45.533 0.0 595