Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0786 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACGCCCTGATCTTCGCTCCAATAATCATGAAGATGACAACCGGCAGGACCACGACGACGATGACCCTCAAGGGCTTGAGCTAGTTGCTCCCAACTCGGGTGGATCTGGCGGTGGAAGTGGCGGTGGCGGCGAGGTTAGTGGTCGTCGGCCAAGGGGTAGGCCTGCTGGCTCGAAGAACAAGCCGAAACCGCCGGTGATCATTACTAGAGAAAGCGCAAACACGCTTAGGGCTCATATCCTTGAAGTTAGCAGCGGCTCCGATGTGTTTGACTCGGTGGCGACCTATGCGAGGAAGCGGCAGCGAGGGATCTGCGTCCTCAGTGCCAGTGGCACCGTTACCAACGTGACCTTGCGGCAGCCAACAGCCGCTGCTGTTGCGACCCTGCACGGGAGGTTTGAGATACTGTCCTTGGCTGGATCGTTTTTGCCGCCTCCAGCTCCGCCGGGTGCCACCAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTGCCTTGATAGCTGCCGGGCCTGTTATTGTTATTGCTTCCTCATTTTCAAACGTAGCATATGAGAGATTGCCCTTAGATGAAGAAGAACCACTACTGATGCAGCAAGGTCAATCTTCCGGCAGTGGCGGCGGTGGCGGCAACTCGTTCCCGGAACCGTCTTCAGGGCTGCCGTTCTTTAATCTGCCTTTAAACATGCCGCAGTTACCGGTTGATGGCTGGGCCGAAAACTCAGGTGGTGGGGGTGGTGGTGGGAGGCAACCATATTGA 831 0.562 MAGLDLGSASHFVHQLQRPDLRSNNHEDDNRQDHDDDDPQGLELVAPNSGGSGGGSGGGGEVSGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKRQRGICVLSASGTVTNVTLRQPTAAAVATLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEEEPLLMQQGQSSGSGGGGGNSFPEPSSGLPFFNLPLNMPQLPVDGWAENSGGGGGGGRQPY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0786 276 MobiDBLite consensus disorder prediction 20 41 - -
Lele38g0786 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 222 - -
Lele38g0786 276 CDD DUF296 93 175 IPR005175 -
Lele38g0786 276 FunFam AT-hook motif nuclear-localized protein 92 218 - -
Lele38g0786 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 229 IPR014476 GO:0003680
Lele38g0786 276 MobiDBLite consensus disorder prediction 1 82 - -
Lele38g0786 276 MobiDBLite consensus disorder prediction 222 243 - -
Lele38g0786 276 Gene3D - 92 223 - -
Lele38g0786 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 205 IPR005175 -
Lele38g0786 276 ProSiteProfiles PPC domain profile profile. 89 225 IPR005175 -
Lele38g0786 276 MobiDBLite consensus disorder prediction 222 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0786 Lele-ChrLele38 19490447 19491277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0786 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 61.279 4.91e-95 280