Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0772 ATGTGGGGGATCTCTTTTCAGTTAAAACTAAATACAGCCATCTATTTGAATGCTAGAATTCTTCATATGACATCACTTTGTCCTGGGGCATGCTGCCATGTATTTGCAAGTGTACGGAAAGCAGCCATTGTGGTTCATAGCTTTAGTACTCGCATCTTCTCTTGTCACTCTCATAATTTGTACTTAGTGAGGTTGAGAATGGAAGAACCACAGCTGGTTTCTAGAGGAGCAGAAGCACTCCTTCATCTATCTCCTGGATCCTCTATTTCTGTTGCTTATCATCCTCTTTTTGGACCTCATGATGATCTCATCTTCCTAGAGCTTGACGAGAAACTTCTCCCAGAAGTTCTTCATGAAAGGGTGGTTCTAAGAGGACAGCCAGATGAAGATGCAGTTCTTTGCACTCCATCCAAAACTTATTCCATCAAGTTTGTTGGAACTTCCAATTCTGTATTCCTTGTACCACCAAATCAATCAGAATATCATCCACCTCCACAAGAGAGTGATGGTCATAATGATCATGCCCAAAAACCTGTTGTATCTGTGATCAAAGTTGTGCCTGGTAGCATGGAGCTTGTTGAGGTTGCTCCTAGACTTGATAAACTCAAGTCACTTCTTTCAGAGAACCCTTACAGTTGTGACGAGTTAGAAGTAGAAAATTTAGAAGGCAACTACGAACCTAGAACAGGATTATACAATTGGAATGACCTTGTTGACAATATTCAAGCTAGTGATGATGAAATAAGGTCTGGACTTGAGGCACTTTCTGCTGTTGAGATTAATGGGCATTGGAGATTAGTGGATGAGAGTTACATGCTCACCATTCTAAGAATGCTTTTGTACAATTCAGTGTTGAATGACTGGTCGCGTAATGCTCTTAATGAAGATGAAGTTGTGAATATTCTGGAATCAGATGGATTTCCAAGGGTACTTGCAAAACACTGTTTGCATGTATTTGGAGAGAAAGTAAATGATGATCTGGGTAGCTGTGTCCGGAAATTGGACGACAAGCGAGTGTGTGTGCAGTTTGCAAGGGAAATCCTGAGAGGAGGAAAGAAAAAGTTGAAGAGTTTCATGGATGAATGGAGGCAGAAGATTCCAGATGGCATGCAACCCACTTTTGATCTTTTGGAAGGAGAGGTTTTGACTGAAAGGGTCGGTGTTGAGACATGGATTCATGCCTTCAGTGTTTCATCTTTGCCCTCCACTCCAGCGGAACGTTTCTCCATCCTTTTCAGAGAACGGAAAAAGTGGGATTGGAAGGATCTACAGCCTTATATTAGGGATCTAAACGTACCAGGTCTTTCTTCAGAAGCTTTGCTTCTCAAATACACCCGAAGAACACAACCAACTCCAGATGCAGAACCAGTTTTCAGTGCAAGATAA 1386 0.417 MWGISFQLKLNTAIYLNARILHMTSLCPGACCHVFASVRKAAIVVHSFSTRIFSCHSHNLYLVRLRMEEPQLVSRGAEALLHLSPGSSISVAYHPLFGPHDDLIFLELDEKLLPEVLHERVVLRGQPDEDAVLCTPSKTYSIKFVGTSNSVFLVPPNQSEYHPPPQESDGHNDHAQKPVVSVIKVVPGSMELVEVAPRLDKLKSLLSENPYSCDELEVENLEGNYEPRTGLYNWNDLVDNIQASDDEIRSGLEALSAVEINGHWRLVDESYMLTILRMLLYNSVLNDWSRNALNEDEVVNILESDGFPRVLAKHCLHVFGEKVNDDLGSCVRKLDDKRVCVQFAREILRGGKKKLKSFMDEWRQKIPDGMQPTFDLLEGEVLTERVGVETWIHAFSVSSLPSTPAERFSILFRERKKWDWKDLQPYIRDLNVPGLSSEALLLKYTRRTQPTPDAEPVFSAR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0772 461 Pfam Sister chromatid cohesion protein Dcc1 105 427 IPR019128 GO:0007064|GO:0031390
Lele38g0772 461 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 75 461 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0772 Lele-ChrLele38 19223303 19225675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0772 76 461 C3H Transcription Factor Family AT2G44580 57.398 8.23e-161 458