Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0771 ATGCCTCCAAGGAAGAAACCCAGCTCTACTTCCAATAAATCGAATCCAAGCAGCCAGGCTCAACCTTCCAAGTTCGGCATTCAACATTTTTTTGAGCGCCACACCCAGAATGCTCTTCTGGCCTCTCAGAAGCAGCCTAAAAATGATGCACCAGCTAACCGTCCCGTTTCTGTTCCCCAAGATTCCAAATATGTTGCACCTCCTGACTCTCATATTCCATCTGTTACTGTGTCGCAAGCTGTTGCTCCAAACAATTTAGATTCCGTTCTTCCCAAGGCTGAATATAATTTGAACTCAGCCTTGACTGGGCCAAAAAGGGGGAATTCAGAATTGCAAAAGATTAAAGACATCCCACCAGTAGGAGCAAATGAATTCAATAACGTGTTGCAGAATACTCCTTCAGAGAATTGGCCAATACCAGGGATTGATGCAGCGGATAATCTTCCTGAAGAGTCTCCGGAAATTTCTAAGATTGGGCCCCATAAGCGCTCCAAGTTCTCGCCTGGGATGTTCATAAAACAGAGCCAAGATGATGGGGTTGATGAAGTTATATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACACATGCCTCAGATAATTCAAGTTTTGGCTGAATCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTGACTGAAGGTGGTAAATTTGGAAAGTTACTTACTTCAACAGCTACAAAGGCTGCTGAGAGGTCAACGGTGTCTAAGAATGAAAAAGGCTTGAAACGTATAAACCCAGACCAAGACATGGTTTTTAATGTCAGTTCAACTACTGTGAATGATTCTGGAGTAATTACTGCACAGAGCCCCTTCAGAACTCCGCCATCTTTATCCTATTGCTATGATAAGGTGCAGCTTGTCAGGGATGTTGAGCACAATGGACTGTTTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAACTGTTAGACCAAGTCGAAGATGCCATATGTGTTGAAGATGCTAAAATTTGTGATAAAAGTGCAAATTACATTAAGTCTCAAGATGGAATTGTTGATAATCTGCCCATCAGAGTTGACTGTACAGCAGAAAGCACTATAGTTCATACACCTAAAGAGGCCATCGGTGTGTCCAATTCTAATTATTTGGTGTTGGAGGTATCTGAAAAACATAGGCTGGCTAATTCATCTTCTTTGCAAGGCCAATACAAGGTGCTTCGCTTAATAAATGAACAAACTGGAGAAGAGAACGCTGTAAACTTGTTGGAAGAGTGGTCTTACAGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATCAGGGGCATTGTGATGTAGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGGTGTCTGGATCTCGGGTAGCTGCAAGTTTTACTTGTCCAAGGAGAACTGTCTTAGATGAGAGGCTAAAATATAATGAGTACTCAATTGCTGCATTAACTGGAACCTTACTTCACCAAATTTTTCAGGCTGGACTCGTCAAGGATAGTCCTACTATAAACTTCTTAGAGGAATATGCACGATTGGTACTCCAGAGAAACATTGAAAGCTTGTATGCATGTGGAGTAAATGAAAATGATGTACACAAAACCTTGATAGATGCTATCCCACGAATGTTAAATTGGATCAAACTGTTCAAGAATTCAGAGGAAAAGAAAGATGCTTATGTTGATTTTGGATGTGATGATGGGATAAAGAAAGTCGAAATATCCGAGGTGATTGATATTGAGGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCTGTCACTGTGAAAGTTCCACCAAAGGGAAATGAAGCAGATGAGAAGGTCATGCCACTAGAGTTTAAAACTGGGAAAGCAATGTCTGGACAGTCATCTATAGAACACCGTGCCCAAGTGATCTTATACACTCTTCTGATGTCTGAAAGGTACCTGAAGATTATTGATTCTGGTCTTCTATATTATCTCCAGTCAGATCAGACAGAGGGCATTGTAGTTCAAAGATCTGACTTAGTTGGTCTAATCATGCGACGTAATGAGCTTGCAAGTGATATTCTGAAGGCATTAACCACACAACAACTGCCTCCAATGTTACAGAGTCCAAGCATTTGCAGAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCATAAGGTTCAAGGAGGAAGTGCAAAGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCACCTTTCATCTACTTATTGTAAGTTCCTCTTCCATTGGGATCGGCTGATTGACTTAGAAGCAAAACAGACTGAGCTTGTGAGGAAAGAGATGTGGCGATCACATACTTTTAAAAGTCAGAACAGTACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAAGATTACGTCTCAGAAATCTCTTAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTGATCCATCTTCTCTATCTGAAGTGTCTGATGGTGATACTTCTAATGCTTCAACAAATTATTTAGATCTCAAACTAAGAACTGGAGACTATGTGATATTGAGCTCGGAATCTAGCCATCAAGTTATTGCTAGTGGGGTGATTACAGATATTAGTCATGCCCATGTTTCAGTTTCCTTTTCAAAGCGCCTGAGGATTCCTGGAAGCACCTCCACTTGCCAAGATCTCAATAAAAAGGTTTGGAGAATTGATAAGGATGAAGCTGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAACCTTTTCTCCAAAATGCTCAAAGTACTCATCTGAGGAAAATAATTGTTGATCTTGAGGCTCCTAAATTTGACAGCGGGTCTATGGTCAGTCAGGACCCAGCAATATCATATGTGTGGTCAGAGAAGAGTTTGAACGATGATCAGCGTAGATCAATCCTCAAGATTCTTACGGCAAAGGATTACGCTCTCATTCTAGGAATGCCTGGAACAGGAAAGACATCGACCATGGTTCATGCTGTGAAAGCATTATTAATCCGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGACGTGAAGCTGTGCATGAGGAGGTTAGAGAACACTGTCTTTCAGCAACGAATGCACAAAATGTCGATGAGATCAAAGTAAGGTTAGAACAAGTTAAAGTAGTTGCAGTTACTTGTCTGGGCATCACCAGTCCCTTGCTTGCCAACAGCACTTTTGATGTATGCATTATGGATGAAGCTGGACAGACAACTCTACCAGTGTCTTTGGGCCCTCTCATGTTTTCTTCAATGTTTGTACTTGTGTGTGATCACTATCAACTTCCTCCGCTTGTTCAGAGTGCAGAGGCTCGAGAGAGTGGTATGGGGATAAGTTCATTTTGTAGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGTCATTATGGACCTGTCAAATGTCTTGATATATGGTGATAGGTTAAGGTGCGGTTCCACTGATATTGCTAATGCAAAACTTGAGTTTTCTACCTTAAAATGTGGCTTACCTTGGCTAAAAAATGTTTTGAATCCAGGCAGGCCAGTGATATTTATTGATACTGATAAATTGCCCCCTTTAGAAGCGAGAGAACAGAAGACTATAAATAACCCTGTAGAAGCTCACATAATTGTTGAGATAGCAAATGCATTAATAAAAAATGGAATTGGTGAAGAATATGTTGGCATTATTACACCCTACAATTCCCAGGCAAACCTCATCCGTCAGGCTGCTTGTATGACCTCGTTGGAGATTCATACCATTGATAAATACCAGGGTAGAGATAAAGATTGTATATTAGTATCCTTTGTGAGGTCTAGTGAAAATCCATCAAGCTGTGCTTCTTCTCTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTCACACGGGGCAAGAAAAAGCTGATAATGGTGGGATCTTGTAGAACTCTATCAAAGGTTCCATTACTGAAGCTTCTCATAAAAAAGGTTGAGCAGCAATCAGGTATTGTTAGTGTGTCTAAGAAGGATATCTATCAGAAAGGAGAGCTCAAAAGGTGTTCCCAGTACATGATGAGATGA 4203 0.404 MPPRKKPSSTSNKSNPSSQAQPSKFGIQHFFERHTQNALLASQKQPKNDAPANRPVSVPQDSKYVAPPDSHIPSVTVSQAVAPNNLDSVLPKAEYNLNSALTGPKRGNSELQKIKDIPPVGANEFNNVLQNTPSENWPIPGIDAADNLPEESPEISKIGPHKRSKFSPGMFIKQSQDDGVDEVIWKISPVNERLQAVSKHMPQIIQVLAESSRINLLPVGISSENQTSLTEGGKFGKLLTSTATKAAERSTVSKNEKGLKRINPDQDMVFNVSSTTVNDSGVITAQSPFRTPPSLSYCYDKVQLVRDVEHNGLFDQLYLRQHKKALLELLDQVEDAICVEDAKICDKSANYIKSQDGIVDNLPIRVDCTAESTIVHTPKEAIGVSNSNYLVLEVSEKHRLANSSSLQGQYKVLRLINEQTGEENAVNLLEEWSYSVVAPGDTVNIIGQFDDQGHCDVDHDNNFLIVHPDILVSGSRVAASFTCPRRTVLDERLKYNEYSIAALTGTLLHQIFQAGLVKDSPTINFLEEYARLVLQRNIESLYACGVNENDVHKTLIDAIPRMLNWIKLFKNSEEKKDAYVDFGCDDGIKKVEISEVIDIEEMAWAPKYGLKGMIDASVTVKVPPKGNEADEKVMPLEFKTGKAMSGQSSIEHRAQVILYTLLMSERYLKIIDSGLLYYLQSDQTEGIVVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQSPSICRGCRHLNVCSIYHKVQGGSAKSSGLGDVFDSHTNHLSSTYCKFLFHWDRLIDLEAKQTELVRKEMWRSHTFKSQNSTGLSSVILDASNKITSQKSLKDNCFIYRFVRCDPSSLSEVSDGDTSNASTNYLDLKLRTGDYVILSSESSHQVIASGVITDISHAHVSVSFSKRLRIPGSTSTCQDLNKKVWRIDKDEAVTSFAIMRFNLVQPFLQNAQSTHLRKIIVDLEAPKFDSGSMVSQDPAISYVWSEKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRREAVHEEVREHCLSATNAQNVDEIKVRLEQVKVVAVTCLGITSPLLANSTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVCDHYQLPPLVQSAEARESGMGISSFCRLSEAHPQAISALQSQYRMCQVIMDLSNVLIYGDRLRCGSTDIANAKLEFSTLKCGLPWLKNVLNPGRPVIFIDTDKLPPLEAREQKTINNPVEAHIIVEIANALIKNGIGEEYVGIITPYNSQANLIRQAACMTSLEIHTIDKYQGRDKDCILVSFVRSSENPSSCASSLLGDWHRINVALTRGKKKLIMVGSCRTLSKVPLLKLLIKKVEQQSGIVSVSKKDIYQKGELKRCSQYMMR 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0771 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 978 1363 IPR027417 -
Lele38g0771 1400 Gene3D - 1177 1386 IPR027417 -
Lele38g0771 1400 MobiDBLite consensus disorder prediction 7 25 - -
Lele38g0771 1400 FunFam DNA replication helicase Dna2 913 1176 - -
Lele38g0771 1400 Gene3D - 473 737 IPR011604 -
Lele38g0771 1400 Pfam AAA domain 1156 1355 IPR041679 -
Lele38g0771 1400 MobiDBLite consensus disorder prediction 35 50 - -
Lele38g0771 1400 Pfam AAA domain 979 1073 IPR041677 GO:0004386
Lele38g0771 1400 Pfam AAA domain 1081 1146 IPR041677 GO:0004386
Lele38g0771 1400 PANTHER DNA2/NAM7 HELICASE FAMILY 6 1375 IPR045055 -
Lele38g0771 1400 Pfam DNA replication factor Dna2 418 619 IPR014808 -
Lele38g0771 1400 Pfam Domain of unknown function DUF83 629 737 IPR022765 -
Lele38g0771 1400 CDD SF1_C_Upf1 1179 1372 IPR041679 -
Lele38g0771 1400 FunFam DNA replication helicase 1177 1390 - -
Lele38g0771 1400 FunFam DNA replication helicase Dna2 583 737 - -
Lele38g0771 1400 MobiDBLite consensus disorder prediction 1 71 - -
Lele38g0771 1400 CDD DEXXQc_DNA2 978 1178 - -
Lele38g0771 1400 Gene3D - 902 1176 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0771 Lele-ChrLele38 19202678 19221078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0771 1 1120 Core DNA Replication Machinery Family AT1G08840 54.009 0.0 1111