Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0764 ATGGAAAGTGATAATAACTTCTCTACCACACCCTCTTCTTCTTCATCATCATCATCATCTTCTTCCTTTTCTTCTCCATCTTCTTCATTATCAACGTCAACATCAGCAACAGTTTCATGTTTGAAATTCAAGCATGATCAGTCTGAAAGTGATGATCTGAATGGGAAGCAACGGAAAAGCAAGAAGAGACAGAGAAGTGAGAGTGATGATAACAATAATTCTGAAGGGAATGATACTAAGCATTCTACTTACAGAGGTGTGAGAATGAGAGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAGAAGTCAAGAATATGGCTTGGAACATTTCCTACTGCAGAAATGGCGGCTCGAGCCCATGATGTAGCCGCTTTAGCCATCAAAGGTCAATCGGCTTACCTCAATTTCCCAGAATTCGCTCACCAGCTTCCCCAGCCAGCCAGCTCGGCTCCCAAGGATATCCAGGCCGCGGCTACGAAGGCGGCGGCAGCCACCACCATGTTCAATGAGACCAAACACTATCAAGCCGAAGAAGAAGCTATAGGAGCCGAGCCGAACCAGGGTGAGCAGGCGACTTCTTCTTCTTCTTCTTATTCAAGTTCTGTTCCTGTGGACGAAGACGCATTATTTGATCTTCCAGATCTCTTCACTGATGAGGAAATTAATGGAGTCTTCTCATATTCTTCTTGGAATTTATGTGCAGTAGTTGATAGTGGTGGTTTAAGGCTTGATGAGCCTTTTTTATGGGAGAAATATTAA 768 0.4401 MESDNNFSTTPSSSSSSSSSSSFSSPSSSLSTSTSATVSCLKFKHDQSESDDLNGKQRKSKKRQRSESDDNNNSEGNDTKHSTYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGQSAYLNFPEFAHQLPQPASSAPKDIQAAATKAAAATTMFNETKHYQAEEEAIGAEPNQGEQATSSSSSYSSSVPVDEDALFDLPDLFTDEEINGVFSYSSWNLCAVVDSGGLRLDEPFLWEKY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0764 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 61 222 - -
Lele38g0764 255 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Lele38g0764 255 MobiDBLite consensus disorder prediction 185 204 - -
Lele38g0764 255 MobiDBLite consensus disorder prediction 44 85 - -
Lele38g0764 255 CDD AP2 82 141 IPR001471 GO:0003700|GO:0006355
Lele38g0764 255 FunFam Ethylene-responsive transcription factor 2 82 141 - -
Lele38g0764 255 Gene3D AP2/ERF domain 83 141 IPR036955 GO:0003700|GO:0006355
Lele38g0764 255 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Lele38g0764 255 MobiDBLite consensus disorder prediction 189 204 - -
Lele38g0764 255 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
Lele38g0764 255 MobiDBLite consensus disorder prediction 1 85 - -
Lele38g0764 255 MobiDBLite consensus disorder prediction 1 43 - -
Lele38g0764 255 Pfam AP2 domain 84 132 IPR001471 GO:0003700|GO:0006355
Lele38g0764 255 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Lele38g0764 255 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0764 Lele-ChrLele38 19092798 19093565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0764 76 251 AP2-EREBP Transcription Factor Family AT2G44940 51.471 7.09e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele38g0764 AP2 1.7e-13 CL0081