Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0751 ATGTTGGGATACGAATGGGGGAATCCTCCATCCACGATAGTGCTCGCTGGAAATGAAGAAGCTGCGGTTACTACCGGTGCAGATTCTGACCAGACCCACCGGCAAATTTTCGACCACTATACTTCTCATTCCTTATTGCCGGAGCAGCTTCTTCATCAGCAACACCACCACCAGCCGGCAGGCCCCACACAACACGCCACCGCCACTTCCACCGCTGATTTCTCTCACTACCAGTTTAACCCCCACCACCCCCACCACAGCCACAATATTCAGCACTCCTTCTTTGACCCACGCGCCTTCCCCGGCGCGTCCTCTTCTTCGTTCCCTTCACCACAGCTTCATCATCCCCCTCCTCCTTCCATGCTCTCTCTTGACCCGCTTCCTGGCGTCAACGCCGGCGCCCACTGTGGACCTGGTGGGTTTCTGGTAGTTCCCAAGTCGGAGGACATGGGTCGGTCCACTGACTTCCCAGCGTCGAGAATTGGGCTCAACCTTGGTGGCCGCACGTACTTCTCATCGTCGGAGGATGACTTCGTAAGCCGTCTCTACCGCCGGTCCAGGCCAGCCGAAGCGGGGTCAATGATGATGGCGTCGTCGAACTCGCCTCGTTGCCAAGCCGAAGGCTGCAATGCTGATCTATCAAACGCGAAGCACTACCACCGCCGTCACAAGGTGTGCGAGTTTCACTCCAAGGCGGCCACCGTCATCGCCGCTGGCTTAACCCAGCGATTCTGCCAACAGTGTAGCAGGTTCCATCTTCTTTCTGAGTTTGACAATGGAAAACGAAGCTGCAGGAAGAGACTTGCAGATCATAATCGTCGCAGAAGAAAAACCCAGCAGCCAAATCCAGAAATCATGAAAACCCAGATCGAGAATTCACCAAATTCCACTTTTGAAAGTGTTACAAGATCTCCACCGGACTCCGGAGCTCAGGCGATGTCATCGGTGACTGTGGCTGTGTCTCCACCGGACTATTTCCGGCAAACGGCATATCAGAATCAGAAGAATAGTCCATCGGCAACATCAAGCTCACTGTTCTTCTCAAGCGGGTAG 1053 0.5461 MLGYEWGNPPSTIVLAGNEEAAVTTGADSDQTHRQIFDHYTSHSLLPEQLLHQQHHHQPAGPTQHATATSTADFSHYQFNPHHPHHSHNIQHSFFDPRAFPGASSSSFPSPQLHHPPPPSMLSLDPLPGVNAGAHCGPGGFLVVPKSEDMGRSTDFPASRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEAGSMMMASSNSPRCQAEGCNADLSNAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPNPEIMKTQIENSPNSTFESVTRSPPDSGAQAMSSVTVAVSPPDYFRQTAYQNQKNSPSATSSSLFFSSG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0751 350 Pfam SBP domain 204 277 IPR004333 GO:0003677
Lele38g0751 350 Gene3D - 195 265 IPR036893 GO:0003677|GO:0005634
Lele38g0751 350 SUPERFAMILY SBT domain 202 280 IPR036893 GO:0003677|GO:0005634
Lele38g0751 350 MobiDBLite consensus disorder prediction 282 350 - -
Lele38g0751 350 MobiDBLite consensus disorder prediction 270 350 - -
Lele38g0751 350 FunFam Squamosa promoter-binding-like protein 14 195 265 - -
Lele38g0751 350 SUPERFAMILY beta-sandwich domain of Sec23/24 48 345 - -
Lele38g0751 350 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 184 339 IPR044817 GO:0003677
Lele38g0751 350 MobiDBLite consensus disorder prediction 75 126 - -
Lele38g0751 350 ProSiteProfiles Zinc finger SBP-type profile. 201 278 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0751 Lele-ChrLele38 18938105 18940428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0751 1 251 SBP-box Gene Family AT1G02065 46.691 1.30e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele38g0751 SBP 3.8e-31 No_clan