Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele38g0745 | ATGCTTGCCACAACGGCGTTTTCCTCCGTCTACGCCTTCCGGTTCGCCACCATTAGACCATCTGAATCAAGTTCAACCAATTCTTTTCCTCTGAAGCTCAGAGCATCTCTCCACGACTATCCGCTCGCAAGCAAAATTGTGGTTAAAAGTAATGCAATGTTTCTTCATTTGATGCTTACAATTGTGGAACTAGTTATTCATTCTATGGCATGTGATTCTGTGTCATGGTTCCACCTTTTAGATTTGCCATATTCTGCTGGTGAGACTAATCTTGAGAAGGCATTTTCAAGCTTTGGTGAGATAGCTGAGGTTAAAGTTTTGAAAGATACCACAAAAAGATCTAAGGGATATGCCTTTATTCAGTACACATGTCAAGAAGATGCACTTGCACTAGAAAGCATGGATCAAAAGGCATTTGATGGGCGGAAAGTCTATGTAGAAATTGCAAAACCTGGGAAGGATGCTTTTCGTGGCCACCAGAGGACCTCAGGGCCCCCAAAGAAGTGGCTTAAGCCAGATCAAGAGGAAGTGGTGGATTGCTGACAGCTTGAAGTTGGACACAACTGCGGTATCGAACAGGCCATTGTATGCCTAGCATAG | 600 | 0.4383 | MLATTAFSSVYAFRFATIRPSESSSTNSFPLKLRASLHDYPLASKIVVKSNAMFLHLMLTIVELVIHSMACDSVSWFHLLDLPYSAGETNLEKAFSSFGEIAEVKVLKDTTKRSKGYAFIQYTCQEDALALESMDQKAFDGRKVYVEIAKPGKDAFRGHQRTSGPPKKWLKPDQEEVVDCXQLEVGHNCGIEQAIVCLA | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele38g0745 | 199 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 82 | 144 | IPR000504 | GO:0003723 | |
Lele38g0745 | 199 | Gene3D | - | 78 | 174 | IPR012677 | - | |
Lele38g0745 | 199 | SUPERFAMILY | RNA-binding domain, RBD | 70 | 164 | IPR035979 | GO:0003676 | |
Lele38g0745 | 199 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 75 | 151 | IPR000504 | GO:0003723 | |
Lele38g0745 | 199 | CDD | RRM_SF | 78 | 147 | - | - | |
Lele38g0745 | 199 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 81 | 165 | - | - | |
Lele38g0745 | 199 | SMART | rrm1_1 | 76 | 147 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele38g0745 | Lele-ChrLele38 | 18728888 | 18734978 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele38g0745 | 43 | 150 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 28.696 | 2.43e-08 | 51.2 |