Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0745 ATGCTTGCCACAACGGCGTTTTCCTCCGTCTACGCCTTCCGGTTCGCCACCATTAGACCATCTGAATCAAGTTCAACCAATTCTTTTCCTCTGAAGCTCAGAGCATCTCTCCACGACTATCCGCTCGCAAGCAAAATTGTGGTTAAAAGTAATGCAATGTTTCTTCATTTGATGCTTACAATTGTGGAACTAGTTATTCATTCTATGGCATGTGATTCTGTGTCATGGTTCCACCTTTTAGATTTGCCATATTCTGCTGGTGAGACTAATCTTGAGAAGGCATTTTCAAGCTTTGGTGAGATAGCTGAGGTTAAAGTTTTGAAAGATACCACAAAAAGATCTAAGGGATATGCCTTTATTCAGTACACATGTCAAGAAGATGCACTTGCACTAGAAAGCATGGATCAAAAGGCATTTGATGGGCGGAAAGTCTATGTAGAAATTGCAAAACCTGGGAAGGATGCTTTTCGTGGCCACCAGAGGACCTCAGGGCCCCCAAAGAAGTGGCTTAAGCCAGATCAAGAGGAAGTGGTGGATTGCTGACAGCTTGAAGTTGGACACAACTGCGGTATCGAACAGGCCATTGTATGCCTAGCATAG 600 0.4383 MLATTAFSSVYAFRFATIRPSESSSTNSFPLKLRASLHDYPLASKIVVKSNAMFLHLMLTIVELVIHSMACDSVSWFHLLDLPYSAGETNLEKAFSSFGEIAEVKVLKDTTKRSKGYAFIQYTCQEDALALESMDQKAFDGRKVYVEIAKPGKDAFRGHQRTSGPPKKWLKPDQEEVVDCXQLEVGHNCGIEQAIVCLA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0745 199 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 82 144 IPR000504 GO:0003723
Lele38g0745 199 Gene3D - 78 174 IPR012677 -
Lele38g0745 199 SUPERFAMILY RNA-binding domain, RBD 70 164 IPR035979 GO:0003676
Lele38g0745 199 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 75 151 IPR000504 GO:0003723
Lele38g0745 199 CDD RRM_SF 78 147 - -
Lele38g0745 199 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 81 165 - -
Lele38g0745 199 SMART rrm1_1 76 147 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0745 Lele-ChrLele38 18728888 18734978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0745 43 150 Eukaryotic Initiation Factors Gene Family AT4G34110 28.696 2.43e-08 51.2