Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0730 ATGGCTCATTTCACTCTTCATCTTCCATTAACCTCTCAATTCTTCAATCCTCTCGTGGCTTTCTTTTCATTCTTATTGCTCATAGTGAGCGCTTCCTCTTGCTCCTACAACCCTAGAAAGTTTCTGAATTCTTCTTCATCCTACACTTCTGATTCCGATTGGTCTCCGGCTGATGCTACATGGTACGGAAGCCCCAACGGCGCCGGAAGTGATGGTGGTGCTTGTGGATATGGCAGTAGTGTAGGACAACCTCCATTTTCTTCGATGATATCAGCAGGAGGCTCTCCTATATATCAATCAGGCAAAGGCTGTGGAAGTTGCTATGAGGTGAAGTGCACGTCGAATCGAGCATGTTCAGGCAACCCAGTGACGGTGGTGATAACTGATGAGTGTCCTGGGTGTGGTTCTGCTCAGAGATTTCACTTTGATTTGAGTGGCTCTGCTTTTGGCGCCATGTCTGTTTCTGGTCAAGCAGATCAACTACGCAATGCTGGCAAGTTGGAGATTCAATACAGAAGTGTTAAATGCAACTTCCCAGGGAAAACCATAGAATTCAAAGTGGACTCAGGATCAAACCCATATTATTTTGCCGTTGTGATAGAATATGAGAATGGTCACGGCCTTGCCAGCGTTGAACTCAAGGAAGCTCATGAGTCAGCCTCATGGCGTCCCATGCAACAATCATGGGGTGCAGTTTGGAAGCTTGACTCTGGCGGCTCACTGCTTCAGGCACCATTCTCTGTCCGGCTAACCGCACCAGAGTCATCGGATTCTCAAAACTCCGTCGAGGCAAGTAATGTGATCCCTGCAGGGTGGAGTCCTGGTCAGACATATCGATCCCTGGTAAACTTTCACTAA 858 0.4767 MAHFTLHLPLTSQFFNPLVAFFSFLLLIVSASSCSYNPRKFLNSSSSYTSDSDWSPADATWYGSPNGAGSDGGACGYGSSVGQPPFSSMISAGGSPIYQSGKGCGSCYEVKCTSNRACSGNPVTVVITDECPGCGSAQRFHFDLSGSAFGAMSVSGQADQLRNAGKLEIQYRSVKCNFPGKTIEFKVDSGSNPYYFAVVIEYENGHGLASVELKEAHESASWRPMQQSWGAVWKLDSGGSLLQAPFSVRLTAPESSDSQNSVEASNVIPAGWSPGQTYRSLVNFH 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0730 285 Gene3D - 38 177 IPR036908 -
Lele38g0730 285 SUPERFAMILY Barwin-like endoglucanases 46 180 IPR036908 -
Lele38g0730 285 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 194 280 IPR007117 -
Lele38g0730 285 SUPERFAMILY PHL pollen allergen 181 280 IPR036749 -
Lele38g0730 285 PRINTS Major pollen allergen Lol pI signature 153 168 IPR005795 GO:0005576|GO:0019953
Lele38g0730 285 PRINTS Major pollen allergen Lol pI signature 112 122 IPR005795 GO:0005576|GO:0019953
Lele38g0730 285 PRINTS Major pollen allergen Lol pI signature 92 103 IPR005795 GO:0005576|GO:0019953
Lele38g0730 285 PRINTS Major pollen allergen Lol pI signature 185 200 IPR005795 GO:0005576|GO:0019953
Lele38g0730 285 PRINTS Major pollen allergen Lol pI signature 256 273 IPR005795 GO:0005576|GO:0019953
Lele38g0730 285 SMART dpbb_1 90 171 IPR007112 -
Lele38g0730 285 Pfam Lytic transglycolase 91 171 IPR009009 -
Lele38g0730 285 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 72 181 IPR007112 -
Lele38g0730 285 Pfam Expansin C-terminal domain 183 269 IPR007117 -
Lele38g0730 285 PRINTS Expansin/Lol pI family signature 53 68 IPR007118 GO:0005576
Lele38g0730 285 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Lele38g0730 285 PRINTS Expansin/Lol pI family signature 94 112 IPR007118 GO:0005576
Lele38g0730 285 PRINTS Expansin/Lol pI family signature 164 180 IPR007118 GO:0005576
Lele38g0730 285 PRINTS Expansin/Lol pI family signature 222 236 IPR007118 GO:0005576
Lele38g0730 285 Gene3D - 178 285 IPR036749 -
Lele38g0730 285 PANTHER EXPANSIN-B3 27 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0730 Lele-ChrLele38 18414509 18416525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0730 36 284 Expansin Gene Family AT1G65680 61.200 1.49e-106 309