Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0726 ATGGCTTTGAGTACCCTCGATCAGCATCAATCAAACTTGAAGCATTTCTGTAAGATCTGTAAGAAAGGTTTCGGGTGTGGGAGGGCGCTCGGTGGGCACATGAGAGCTCACGGCATGGGGGAGGACAGCTGGACCGTCGATGACGATGAGGACGCCGAGAGTGACTGGGATGAAAAGCAGGGCGATGGAGGTGGCGCCAATGTCCCGTCGAGTACAAGGCATATGTATGCTCTGAGGACGAACCCTAACAGATTCAAGCCCTGCAGGGTATGTGAGAATTGCGGTAAAGAGTTCTTGTCATGGAATTCCTTTTTTGAACATGGAAATGGAAAGTGCGGTAGTTCCGACCATATGGAGTCGCCAGTTTCTTCCCCGACGTCCGACGGTGATGGTGATGGTGATGACGACATGGGCCAGAGAGGTTGCGGTTCGTATAAACGGAAGAGGTCAGTCAGAACCAAAGTTGGTCCGTTAAATTCTACATGTCCTTTAAGTGAAGAAGATGACCTGGCGGTCAACTGTCTCATGATGTTATCTAACGCCACTATTGATCCTATCGTGGTCACCACCGTTGCCGAGCCGGAGGAATCTAGTGCGTCAGCGAGCAGAGATGAGGAGAGAAGAAACCCTATAAACTTTATCACGCCAATATCTTATTGTGTTCCTGCCTTAGGGGATCACAAAGCCAAAACTACTGTGGTTCCTAAAGGCTTGTTTGAATGCAAAGCATGCAAGAAAATCTTCAATTCTCATCAAGCGTTAGGTGGCCATAGGGCAAGCCACAAGAAAGTTAAAGGCTGCTTTGCTTCGAGACTCGACCAACTCGAAGATAAAGACGATGATGTCATAACTCATGAAGAGTTTCTACCCACAAAATCAAACTCAGTCACTCATCATGGTCATAGTAATCCTTCCAATAATAATGGCACGTTATTAATGGCGTCTTCGTCCAAAAGAAAATCCAAAGTTCATGAATGCTCGATATGTCACCGGACTTTCTCATCGGGACAAGCCCTAGGAGGACACAAGAGGTGTCATTGGATCACCCCAAACGTTCCAGACACGTCCACATTGGCTAGGTTTCAGCAATTTCAAGACCGTATGGAGAGAATGCATCAAATTCCCAAGTTTGATAACTCATCGGAGCATATCGATCTAAAGCTCGACCTCAACCTTCCGGCTCCTCTAGCCGATGAACTGGCACGGCGGACGGAAATTTTCTTACAGCCATGGTTAGGAGGAACGACAAAGCAGAAGGATCAAAATAATAATAATCATACTAATAGTCAATGTCACAGCCCCAGCAACCGCGAAGTACACCACCATCAGCATCGCCATGAAAATGAAAATGACAACGAAGACAACAAAAATAATAACAATAACAGTACTGTTTCCATGGAAAATGTTGAAGATGAAGCTGACAGTAAGTTGAAGTTAGCTAAACTAAGTGAGCTAAAGGACATGAATATAGGTGGGAGTTCTTCCCCATGGTTGCAGGTGGGGGTTGGTTCAACCACTGGTGTGGGAGCTGAACCATAA 1539 0.4626 MALSTLDQHQSNLKHFCKICKKGFGCGRALGGHMRAHGMGEDSWTVDDDEDAESDWDEKQGDGGGANVPSSTRHMYALRTNPNRFKPCRVCENCGKEFLSWNSFFEHGNGKCGSSDHMESPVSSPTSDGDGDGDDDMGQRGCGSYKRKRSVRTKVGPLNSTCPLSEEDDLAVNCLMMLSNATIDPIVVTTVAEPEESSASASRDEERRNPINFITPISYCVPALGDHKAKTTVVPKGLFECKACKKIFNSHQALGGHRASHKKVKGCFASRLDQLEDKDDDVITHEEFLPTKSNSVTHHGHSNPSNNNGTLLMASSSKRKSKVHECSICHRTFSSGQALGGHKRCHWITPNVPDTSTLARFQQFQDRMERMHQIPKFDNSSEHIDLKLDLNLPAPLADELARRTEIFLQPWLGGTTKQKDQNNNNHTNSQCHSPSNREVHHHQHRHENENDNEDNKNNNNNSTVSMENVEDEADSKLKLAKLSELKDMNIGGSSSPWLQVGVGSTTGVGAEP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0726 512 Pfam C2H2-type zinc finger 323 348 - -
Lele38g0726 512 Pfam C2H2-type zinc finger 239 263 - -
Lele38g0726 512 Pfam C2H2-type zinc finger 15 37 - -
Lele38g0726 512 ProSitePatterns Zinc finger C2H2 type domain signature. 17 37 IPR013087 -
Lele38g0726 512 ProSitePatterns Zinc finger C2H2 type domain signature. 326 346 IPR013087 -
Lele38g0726 512 ProSitePatterns Zinc finger C2H2 type domain signature. 241 261 IPR013087 -
Lele38g0726 512 ProSiteProfiles Zinc finger C2H2 type domain profile. 239 266 IPR013087 -
Lele38g0726 512 MobiDBLite consensus disorder prediction 435 454 - -
Lele38g0726 512 SMART c2h2final6 324 346 IPR013087 -
Lele38g0726 512 SMART c2h2final6 15 37 IPR013087 -
Lele38g0726 512 SMART c2h2final6 239 261 IPR013087 -
Lele38g0726 512 MobiDBLite consensus disorder prediction 469 483 - -
Lele38g0726 512 MobiDBLite consensus disorder prediction 414 434 - -
Lele38g0726 512 MobiDBLite consensus disorder prediction 112 147 - -
Lele38g0726 512 MobiDBLite consensus disorder prediction 414 512 - -
Lele38g0726 512 SUPERFAMILY beta-beta-alpha zinc fingers 321 347 IPR036236 -
Lele38g0726 512 MobiDBLite consensus disorder prediction 488 502 - -
Lele38g0726 512 MobiDBLite consensus disorder prediction 37 72 - -
Lele38g0726 512 PANTHER OS02G0659100 PROTEIN 7 506 - -
Lele38g0726 512 ProSiteProfiles Zinc finger C2H2 type domain profile. 324 346 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0726 Lele-ChrLele38 18307818 18309356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0726 117 392 C2H2 Transcription Factor Family AT1G02040 34.859 2.35e-31 122